Gene : Glyma.02G273000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12581 - HIV-1 REV BINDING PROTEIN 2, 3 Genomic Order:  2730
Name:  ? Glyma.02G273000 Secondary Identifier:  ? PAC:30507748
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G273000 0.5kb upstream 0.5kb upstream 4757 true Chr02: 45655369-45660125 Glycine max
Glyma.02G273000 0.5kb upstream 0.5kb upstream 500 false Chr02: 45655369-45655868 Glycine max
Glyma.02G273000 0.5kb downstream 0.5kb downstream 4757 true Chr02: 45655869-45660625 Glycine max
Glyma.02G273000 0.5kb downstream 0.5kb downstream 500 false Chr02: 45660126-45660625 Glycine max
Glyma.02G273000 1.0kb upstream 1.0kb upstream 5257 true Chr02: 45654869-45660125 Glycine max
Glyma.02G273000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45654869-45655868 Glycine max
Glyma.02G273000 1.0kb downstream 1.0kb downstream 5257 true Chr02: 45655869-45661125 Glycine max
Glyma.02G273000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45660126-45661125 Glycine max
Glyma.02G273000 2.0kb upstream 2.0kb upstream 6257 true Chr02: 45653869-45660125 Glycine max
Glyma.02G273000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45653869-45655868 Glycine max
Glyma.02G273000 2.0kb downstream 2.0kb downstream 6257 true Chr02: 45655869-45662125 Glycine max
Glyma.02G273000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45660126-45662125 Glycine max
Glyma.02G273000 5.0kb upstream 5.0kb upstream 9257 true Chr02: 45650869-45660125 Glycine max
Glyma.02G273000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45650869-45655868 Glycine max
Glyma.02G273000 5.0kb downstream 5.0kb downstream 9257 true Chr02: 45655869-45665125 Glycine max
Glyma.02G273000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45660126-45665125 Glycine max
Glyma.02G273000 10.0kb upstream 10.0kb upstream 14257 true Chr02: 45645869-45660125 Glycine max
Glyma.02G273000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45645869-45655868 Glycine max
Glyma.02G273000 10.0kb downstream 10.0kb downstream 14257 true Chr02: 45655869-45670125 Glycine max
Glyma.02G273000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45660126-45670125 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304580 5265 Fabidae View MSA
124064553 5270 Rosid View MSA
123738984 5271 Pentapetalae View MSA
122790120 5272 Eudicot View MSA
122041852 5273 Angiosperm View MSA
121344485 5274 Embryophyte View MSA
123424552 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.15156 0.0 19.8401    
cufflinks 9.7912 0.0 26.5472    
cufflinks 4.66378 0.0 13.536   Low
cufflinks 8.37649 0.0 22.9092    
cufflinks 13.2279 0.0 35.4103   High
cufflinks 9.15453 0.0 24.9263    
cufflinks 11.1984 0.0 30.175    
cufflinks 8.41715 0.0 23.0053    
cufflinks 8.57088 0.0 23.4322    
cufflinks 2.786        
cufflinks 0.846       Low
cufflinks 3.033        
cufflinks 6.052       High
cufflinks 7.874     High High
cufflinks 0.97       Low
cufflinks 2.241        
cufflinks 1.85        
cufflinks 2.874        
cufflinks 3.572        
cufflinks 1.874        
cufflinks 1.329        
cufflinks 2.228        
cufflinks 3.501        
cufflinks 1.329        
cufflinks 1.818        
cufflinks 1.599        

0 Strain