Gene : Glyma.02G270400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33271:SF7 - PLASTID TRANSCRIPTIONALLY ACTIVE 18 Genomic Order:  2704
Name:  ? Glyma.02G270400 Secondary Identifier:  ? PAC:30506674
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G270400 0.5kb upstream 0.5kb upstream 2348 true Chr02: 45438739-45441086 Glycine max
Glyma.02G270400 0.5kb upstream 0.5kb upstream 500 false Chr02: 45440587-45441086 Glycine max
Glyma.02G270400 0.5kb downstream 0.5kb downstream 2348 true Chr02: 45438239-45440586 Glycine max
Glyma.02G270400 0.5kb downstream 0.5kb downstream 500 false Chr02: 45438239-45438738 Glycine max
Glyma.02G270400 1.0kb upstream 1.0kb upstream 2848 true Chr02: 45438739-45441586 Glycine max
Glyma.02G270400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45440587-45441586 Glycine max
Glyma.02G270400 1.0kb downstream 1.0kb downstream 2848 true Chr02: 45437739-45440586 Glycine max
Glyma.02G270400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45437739-45438738 Glycine max
Glyma.02G270400 2.0kb upstream 2.0kb upstream 3848 true Chr02: 45438739-45442586 Glycine max
Glyma.02G270400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45440587-45442586 Glycine max
Glyma.02G270400 2.0kb downstream 2.0kb downstream 3848 true Chr02: 45436739-45440586 Glycine max
Glyma.02G270400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45436739-45438738 Glycine max
Glyma.02G270400 5.0kb upstream 5.0kb upstream 6848 true Chr02: 45438739-45445586 Glycine max
Glyma.02G270400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45440587-45445586 Glycine max
Glyma.02G270400 5.0kb downstream 5.0kb downstream 6848 true Chr02: 45433739-45440586 Glycine max
Glyma.02G270400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45433739-45438738 Glycine max
Glyma.02G270400 10.0kb upstream 10.0kb upstream 11848 true Chr02: 45438739-45450586 Glycine max
Glyma.02G270400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45440587-45450586 Glycine max
Glyma.02G270400 10.0kb downstream 10.0kb downstream 11848 true Chr02: 45428739-45440586 Glycine max
Glyma.02G270400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45428739-45438738 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301617 5265 Fabidae View MSA
124065223 5270 Rosid View MSA
123741295 5271 Pentapetalae View MSA
122787769 5272 Eudicot View MSA
122043400 5273 Angiosperm View MSA
121346471 5274 Embryophyte View MSA
123380389 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.3332 0.0 86.2797 High High
cufflinks 29.7853 0.0 79.5448 High High
cufflinks 16.3311 0.0 44.7139    
cufflinks 19.3829 0.0 52.5524    
cufflinks 10.4735 0.0 30.0114   Low
cufflinks 10.251 0.0 29.4278   Low
cufflinks 17.0698 0.0 46.7301    
cufflinks 22.2343 0.0 59.8374 High  
cufflinks 11.6304 0.0 32.8952    
cufflinks 13.019     High  
cufflinks 3.943        
cufflinks 11.696     High  
cufflinks 4.2        
cufflinks 4.338        
cufflinks 4.486        
cufflinks 22.242     High High
cufflinks 3.22       Low
cufflinks 14.808     High  
cufflinks 16.072     High  
cufflinks 24.437     High High
cufflinks 4.136        
cufflinks 22.276     High High
cufflinks 22.44     High High
cufflinks 3.836       Low
cufflinks 25.361     High High
cufflinks 3.114       Low

0 Strain