Gene : Glyma.02G271100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12555//PTHR12555:SF14 - UBIQUITIN FUSION DEGRADATON PROTEIN 1 Genomic Order:  2711
Name:  ? Glyma.02G271100 Secondary Identifier:  ? PAC:30507651
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G271100 0.5kb upstream 0.5kb upstream 4298 true Chr02: 45498418-45502715 Glycine max
Glyma.02G271100 0.5kb upstream 0.5kb upstream 500 false Chr02: 45498418-45498917 Glycine max
Glyma.02G271100 0.5kb downstream 0.5kb downstream 4298 true Chr02: 45498918-45503215 Glycine max
Glyma.02G271100 0.5kb downstream 0.5kb downstream 500 false Chr02: 45502716-45503215 Glycine max
Glyma.02G271100 1.0kb upstream 1.0kb upstream 4798 true Chr02: 45497918-45502715 Glycine max
Glyma.02G271100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45497918-45498917 Glycine max
Glyma.02G271100 1.0kb downstream 1.0kb downstream 4798 true Chr02: 45498918-45503715 Glycine max
Glyma.02G271100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45502716-45503715 Glycine max
Glyma.02G271100 2.0kb upstream 2.0kb upstream 5798 true Chr02: 45496918-45502715 Glycine max
Glyma.02G271100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45496918-45498917 Glycine max
Glyma.02G271100 2.0kb downstream 2.0kb downstream 5798 true Chr02: 45498918-45504715 Glycine max
Glyma.02G271100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45502716-45504715 Glycine max
Glyma.02G271100 5.0kb upstream 5.0kb upstream 8798 true Chr02: 45493918-45502715 Glycine max
Glyma.02G271100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45493918-45498917 Glycine max
Glyma.02G271100 5.0kb downstream 5.0kb downstream 8798 true Chr02: 45498918-45507715 Glycine max
Glyma.02G271100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45502716-45507715 Glycine max
Glyma.02G271100 10.0kb upstream 10.0kb upstream 13798 true Chr02: 45488918-45502715 Glycine max
Glyma.02G271100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45488918-45498917 Glycine max
Glyma.02G271100 10.0kb downstream 10.0kb downstream 13798 true Chr02: 45498918-45512715 Glycine max
Glyma.02G271100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45502716-45512715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304650 5265 Fabidae View MSA
124065261 5270 Rosid View MSA
123736611 5271 Pentapetalae View MSA
122787635 5272 Eudicot View MSA
122046586 5273 Angiosperm View MSA
121347183 5274 Embryophyte View MSA
123428055 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.80022 0.0 23.5674    
cufflinks 8.19228 0.0 21.9814    
cufflinks 15.0358 0.0 40.3153   High
cufflinks 7.71037 0.0 20.7155    
cufflinks 8.53644 0.0 22.8822    
cufflinks 14.0291 0.0 37.5006   High
cufflinks 5.19799 0.0 14.3221   Low
cufflinks 10.162 0.0 27.1241    
cufflinks 9.03481 0.0 24.1749    
cufflinks 11.537     High  
cufflinks 11.476     High  
cufflinks 11.35     High  
cufflinks 9.691     High  
cufflinks 8.499     High  
cufflinks 6.424     High Low
cufflinks 6.721        
cufflinks 18.175     High High
cufflinks 9.618     High  
cufflinks 7.12        
cufflinks 6.344       Low
cufflinks 8.735     High  
cufflinks 7.21     High  
cufflinks 8.294     High  
cufflinks 12.155     High  
cufflinks 5.81       Low
cufflinks 15.77     High High

0 Strain