Gene : Glyma.02G275500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  2755
Name:  ? Glyma.02G275500 Secondary Identifier:  ? PAC:30509610
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G275500 0.5kb upstream 0.5kb upstream 5207 true Chr02: 45851544-45856750 Glycine max
Glyma.02G275500 0.5kb upstream 0.5kb upstream 500 false Chr02: 45851544-45852043 Glycine max
Glyma.02G275500 0.5kb downstream 0.5kb downstream 5207 true Chr02: 45852044-45857250 Glycine max
Glyma.02G275500 0.5kb downstream 0.5kb downstream 500 false Chr02: 45856751-45857250 Glycine max
Glyma.02G275500 1.0kb upstream 1.0kb upstream 5707 true Chr02: 45851044-45856750 Glycine max
Glyma.02G275500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45851044-45852043 Glycine max
Glyma.02G275500 1.0kb downstream 1.0kb downstream 5707 true Chr02: 45852044-45857750 Glycine max
Glyma.02G275500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45856751-45857750 Glycine max
Glyma.02G275500 2.0kb upstream 2.0kb upstream 6707 true Chr02: 45850044-45856750 Glycine max
Glyma.02G275500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45850044-45852043 Glycine max
Glyma.02G275500 2.0kb downstream 2.0kb downstream 6707 true Chr02: 45852044-45858750 Glycine max
Glyma.02G275500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45856751-45858750 Glycine max
Glyma.02G275500 5.0kb upstream 5.0kb upstream 9707 true Chr02: 45847044-45856750 Glycine max
Glyma.02G275500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45847044-45852043 Glycine max
Glyma.02G275500 5.0kb downstream 5.0kb downstream 9707 true Chr02: 45852044-45861750 Glycine max
Glyma.02G275500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45856751-45861750 Glycine max
Glyma.02G275500 10.0kb upstream 10.0kb upstream 14707 true Chr02: 45842044-45856750 Glycine max
Glyma.02G275500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45842044-45852043 Glycine max
Glyma.02G275500 10.0kb downstream 10.0kb downstream 14707 true Chr02: 45852044-45866750 Glycine max
Glyma.02G275500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45856751-45866750 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314668 5265 Fabidae View MSA
124068793 5270 Rosid View MSA
123737667 5271 Pentapetalae View MSA
122785894 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.756 0.0 109.305 High High
cufflinks 13.3245 0.0 61.0116    
cufflinks 15.2534 0.0 63.2961    
cufflinks 13.803 0.0 69.3057    
cufflinks 23.4199 0.0 93.022 High High
cufflinks 13.8199 0.0 53.163    
cufflinks 21.3112 0.0 98.2454    
cufflinks 13.5893 0.0 66.6992    
cufflinks 23.7065 0.0 107.541 High High
cufflinks 0.821        
cufflinks 2.922       High
cufflinks 0.764       Low
cufflinks 1.04        
cufflinks 0.991        
cufflinks 3.225       High
cufflinks 1.784        
cufflinks 0.435       Low
cufflinks 0.749       Low
cufflinks 1.172        
cufflinks 2.752       High
cufflinks 2.42        
cufflinks 1.936        
cufflinks 1.074        
cufflinks 2.427        
cufflinks 2.324        
cufflinks 1.374        

0 Strain