Gene : Glyma.02G222900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  2229
Name:  ? Glyma.02G222900 Secondary Identifier:  ? PAC:30509236
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G222900 0.5kb upstream 0.5kb upstream 11663 true Chr02: 41061541-41073203 Glycine max
Glyma.02G222900 0.5kb upstream 0.5kb upstream 500 false Chr02: 41061541-41062040 Glycine max
Glyma.02G222900 0.5kb downstream 0.5kb downstream 11663 true Chr02: 41062041-41073703 Glycine max
Glyma.02G222900 0.5kb downstream 0.5kb downstream 500 false Chr02: 41073204-41073703 Glycine max
Glyma.02G222900 1.0kb upstream 1.0kb upstream 12163 true Chr02: 41061041-41073203 Glycine max
Glyma.02G222900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41061041-41062040 Glycine max
Glyma.02G222900 1.0kb downstream 1.0kb downstream 12163 true Chr02: 41062041-41074203 Glycine max
Glyma.02G222900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41073204-41074203 Glycine max
Glyma.02G222900 2.0kb upstream 2.0kb upstream 13163 true Chr02: 41060041-41073203 Glycine max
Glyma.02G222900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41060041-41062040 Glycine max
Glyma.02G222900 2.0kb downstream 2.0kb downstream 13163 true Chr02: 41062041-41075203 Glycine max
Glyma.02G222900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41073204-41075203 Glycine max
Glyma.02G222900 5.0kb upstream 5.0kb upstream 16163 true Chr02: 41057041-41073203 Glycine max
Glyma.02G222900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41057041-41062040 Glycine max
Glyma.02G222900 5.0kb downstream 5.0kb downstream 16163 true Chr02: 41062041-41078203 Glycine max
Glyma.02G222900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41073204-41078203 Glycine max
Glyma.02G222900 10.0kb upstream 10.0kb upstream 21163 true Chr02: 41052041-41073203 Glycine max
Glyma.02G222900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41052041-41062040 Glycine max
Glyma.02G222900 10.0kb downstream 10.0kb downstream 21163 true Chr02: 41062041-41083203 Glycine max
Glyma.02G222900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41073204-41083203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303790 5265 Fabidae View MSA
124068947 5270 Rosid View MSA
123748451 5271 Pentapetalae View MSA
122772624 5272 Eudicot View MSA
122044535 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.88438 0.0 21.042    
cufflinks 5.363 0.0 14.4709    
cufflinks 4.39675 0.0 11.9836   Low
cufflinks 8.38699 0.0 22.3756   High
cufflinks 8.05236 0.0 21.4861    
cufflinks 6.60722 0.0 17.6841    
cufflinks 6.82205 0.0 18.249    
cufflinks 7.38107 0.0 19.7076    
cufflinks 5.50092 0.0 14.8164    
cufflinks 2.59        
cufflinks 1.904        
cufflinks 1.954        
cufflinks 2.998       High
cufflinks 3.641       High
cufflinks 1.876        
cufflinks 1.639       Low
cufflinks 2.033        
cufflinks 2.264        
cufflinks 2.767        
cufflinks 1.439       Low
cufflinks 2.596        
cufflinks 1.691        
cufflinks 1.946        
cufflinks 2.239        
cufflinks 1.477       Low
cufflinks 2.738        

0 Strain