Gene : Glyma.02G227900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24098:SF4 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-RELATED Genomic Order:  2279
Name:  ? Glyma.02G227900 Secondary Identifier:  ? PAC:30508653
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G227900 0.5kb upstream 0.5kb upstream 7228 true Chr02: 41480530-41487757 Glycine max
Glyma.02G227900 0.5kb upstream 0.5kb upstream 500 false Chr02: 41480530-41481029 Glycine max
Glyma.02G227900 0.5kb downstream 0.5kb downstream 7228 true Chr02: 41481030-41488257 Glycine max
Glyma.02G227900 0.5kb downstream 0.5kb downstream 500 false Chr02: 41487758-41488257 Glycine max
Glyma.02G227900 1.0kb upstream 1.0kb upstream 7728 true Chr02: 41480030-41487757 Glycine max
Glyma.02G227900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41480030-41481029 Glycine max
Glyma.02G227900 1.0kb downstream 1.0kb downstream 7728 true Chr02: 41481030-41488757 Glycine max
Glyma.02G227900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41487758-41488757 Glycine max
Glyma.02G227900 2.0kb upstream 2.0kb upstream 8728 true Chr02: 41479030-41487757 Glycine max
Glyma.02G227900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41479030-41481029 Glycine max
Glyma.02G227900 2.0kb downstream 2.0kb downstream 8728 true Chr02: 41481030-41489757 Glycine max
Glyma.02G227900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41487758-41489757 Glycine max
Glyma.02G227900 5.0kb upstream 5.0kb upstream 11728 true Chr02: 41476030-41487757 Glycine max
Glyma.02G227900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41476030-41481029 Glycine max
Glyma.02G227900 5.0kb downstream 5.0kb downstream 11728 true Chr02: 41481030-41492757 Glycine max
Glyma.02G227900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41487758-41492757 Glycine max
Glyma.02G227900 10.0kb upstream 10.0kb upstream 16728 true Chr02: 41471030-41487757 Glycine max
Glyma.02G227900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41471030-41481029 Glycine max
Glyma.02G227900 10.0kb downstream 10.0kb downstream 16728 true Chr02: 41481030-41497757 Glycine max
Glyma.02G227900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41487758-41497757 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312419 5265 Fabidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0191916 0.0 0.078183 Low Low
cufflinks 0.186076 0.0 0.689306 Low  
cufflinks 0.105444 0.0 0.400382 Low  
cufflinks 0.310503 0.0 1.11577    
cufflinks 0.0413573 0.0 0.163494 Low  
cufflinks 0.0358533 0.0 0.142392 Low Low
cufflinks 0.249849 0.0 0.912163    
cufflinks 0.324793 0.0 1.16334    
cufflinks 0.58836 0.0 2.00312   High
cufflinks 0.198        
cufflinks 0.009     Low Low
cufflinks 0.277       High
cufflinks 0.036     Low  
cufflinks 0.049     Low  
cufflinks 0.086        
cufflinks 0.123        
cufflinks 0.021     Low  
cufflinks 0.444       High
cufflinks 0.271       High
cufflinks 0.077     Low  
cufflinks 0.012     Low Low
cufflinks 0.061     Low  
cufflinks 0.124        
cufflinks 0.005     Low Low
cufflinks 0.045     Low  
cufflinks 0.024     Low  

0 Strain