Gene : Glyma.02G227300 G. max Wm82.a2.v1
Defline:  (1 of 113) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2273
Name:  ? Glyma.02G227300 Secondary Identifier:  ? PAC:30506730
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G227300 0.5kb upstream 0.5kb upstream 3616 true Chr02: 41432164-41435779 Glycine max
Glyma.02G227300 0.5kb upstream 0.5kb upstream 500 false Chr02: 41432164-41432663 Glycine max
Glyma.02G227300 0.5kb downstream 0.5kb downstream 3616 true Chr02: 41432664-41436279 Glycine max
Glyma.02G227300 0.5kb downstream 0.5kb downstream 500 false Chr02: 41435780-41436279 Glycine max
Glyma.02G227300 1.0kb upstream 1.0kb upstream 4116 true Chr02: 41431664-41435779 Glycine max
Glyma.02G227300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41431664-41432663 Glycine max
Glyma.02G227300 1.0kb downstream 1.0kb downstream 4116 true Chr02: 41432664-41436779 Glycine max
Glyma.02G227300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41435780-41436779 Glycine max
Glyma.02G227300 2.0kb upstream 2.0kb upstream 5116 true Chr02: 41430664-41435779 Glycine max
Glyma.02G227300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41430664-41432663 Glycine max
Glyma.02G227300 2.0kb downstream 2.0kb downstream 5116 true Chr02: 41432664-41437779 Glycine max
Glyma.02G227300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41435780-41437779 Glycine max
Glyma.02G227300 5.0kb upstream 5.0kb upstream 8116 true Chr02: 41427664-41435779 Glycine max
Glyma.02G227300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41427664-41432663 Glycine max
Glyma.02G227300 5.0kb downstream 5.0kb downstream 8116 true Chr02: 41432664-41440779 Glycine max
Glyma.02G227300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41435780-41440779 Glycine max
Glyma.02G227300 10.0kb upstream 10.0kb upstream 13116 true Chr02: 41422664-41435779 Glycine max
Glyma.02G227300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41422664-41432663 Glycine max
Glyma.02G227300 10.0kb downstream 10.0kb downstream 13116 true Chr02: 41432664-41445779 Glycine max
Glyma.02G227300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41435780-41445779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308842 5265 Fabidae View MSA
124074740 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.40576 0.0 4.48036   High
cufflinks 0.837988 0.0 2.85433    
cufflinks 0.393929 0.0 1.42322    
cufflinks 0.417809 0.0 1.50771    
cufflinks 0.21483 0.0 0.805149 Low Low
cufflinks 0.30631 0.0 1.12635    
cufflinks 1.03324 0.0 3.44018   High
cufflinks 0.32122 0.0 1.17844    
cufflinks 0.282194 0.0 1.04252    
cufflinks 0.276        
cufflinks 0.199        
cufflinks 0.719        
cufflinks 0.307        
cufflinks 0.387        
cufflinks 0.248        
cufflinks 3.458       High
cufflinks 0.111       Low
cufflinks 0.77        
cufflinks 0.921        
cufflinks 4.788       High
cufflinks 0.117       Low
cufflinks 3.981       High
cufflinks 2.809       High
cufflinks 0.245        
cufflinks 4.233       High
cufflinks 0.146       Low

0 Strain