Gene : Glyma.02G231800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10555//PTHR10555:SF155 - SORTING NEXIN Genomic Order:  2318
Name:  ? Glyma.02G231800 Secondary Identifier:  ? PAC:30508660
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G231800 0.5kb upstream 0.5kb upstream 7461 true Chr02: 41894290-41901750 Glycine max
Glyma.02G231800 0.5kb upstream 0.5kb upstream 500 false Chr02: 41894290-41894789 Glycine max
Glyma.02G231800 0.5kb downstream 0.5kb downstream 7461 true Chr02: 41894790-41902250 Glycine max
Glyma.02G231800 0.5kb downstream 0.5kb downstream 500 false Chr02: 41901751-41902250 Glycine max
Glyma.02G231800 1.0kb upstream 1.0kb upstream 7961 true Chr02: 41893790-41901750 Glycine max
Glyma.02G231800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41893790-41894789 Glycine max
Glyma.02G231800 1.0kb downstream 1.0kb downstream 7961 true Chr02: 41894790-41902750 Glycine max
Glyma.02G231800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41901751-41902750 Glycine max
Glyma.02G231800 2.0kb upstream 2.0kb upstream 8961 true Chr02: 41892790-41901750 Glycine max
Glyma.02G231800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41892790-41894789 Glycine max
Glyma.02G231800 2.0kb downstream 2.0kb downstream 8961 true Chr02: 41894790-41903750 Glycine max
Glyma.02G231800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41901751-41903750 Glycine max
Glyma.02G231800 5.0kb upstream 5.0kb upstream 11961 true Chr02: 41889790-41901750 Glycine max
Glyma.02G231800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41889790-41894789 Glycine max
Glyma.02G231800 5.0kb downstream 5.0kb downstream 11961 true Chr02: 41894790-41906750 Glycine max
Glyma.02G231800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41901751-41906750 Glycine max
Glyma.02G231800 10.0kb upstream 10.0kb upstream 16961 true Chr02: 41884790-41901750 Glycine max
Glyma.02G231800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41884790-41894789 Glycine max
Glyma.02G231800 10.0kb downstream 10.0kb downstream 16961 true Chr02: 41894790-41911750 Glycine max
Glyma.02G231800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41901751-41911750 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041026 5273 Angiosperm View MSA
122306330 5265 Fabidae View MSA
124063344 5270 Rosid View MSA
123749355 5271 Pentapetalae View MSA
122789384 5272 Eudicot View MSA
121345182 5274 Embryophyte View MSA
123428162 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.69169 0.0 26.9384    
cufflinks 8.25217 0.0 28.9508    
cufflinks 13.5565 0.0 46.3606   High
cufflinks 11.2583 0.0 38.5557    
cufflinks 9.42167 0.0 32.4725    
cufflinks 7.70367 0.0 27.076    
cufflinks 12.4341 0.0 42.6435   High
cufflinks 8.61159 0.0 29.9223    
cufflinks 5.76996 0.0 21.3664   Low
cufflinks 1.678        
cufflinks 1.088        
cufflinks 1.944        
cufflinks 1.922        
cufflinks 1.753        
cufflinks 0.566       Low
cufflinks 1.866        
cufflinks 0.751       Low
cufflinks 1.56        
cufflinks 1.615        
cufflinks 1.943        
cufflinks 1.379        
cufflinks 1.777        
cufflinks 1.221        
cufflinks 1.3        
cufflinks 1.833        
cufflinks 0.977       Low

0 Strain