Gene : Glyma.02G230700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  2307
Name:  ? Glyma.02G230700 Secondary Identifier:  ? PAC:30506459
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G230700 0.5kb upstream 0.5kb upstream 4333 true Chr02: 41821967-41826299 Glycine max
Glyma.02G230700 0.5kb upstream 0.5kb upstream 500 false Chr02: 41821967-41822466 Glycine max
Glyma.02G230700 0.5kb downstream 0.5kb downstream 4333 true Chr02: 41822467-41826799 Glycine max
Glyma.02G230700 0.5kb downstream 0.5kb downstream 500 false Chr02: 41826300-41826799 Glycine max
Glyma.02G230700 1.0kb upstream 1.0kb upstream 4833 true Chr02: 41821467-41826299 Glycine max
Glyma.02G230700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41821467-41822466 Glycine max
Glyma.02G230700 1.0kb downstream 1.0kb downstream 4833 true Chr02: 41822467-41827299 Glycine max
Glyma.02G230700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41826300-41827299 Glycine max
Glyma.02G230700 2.0kb upstream 2.0kb upstream 5833 true Chr02: 41820467-41826299 Glycine max
Glyma.02G230700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41820467-41822466 Glycine max
Glyma.02G230700 2.0kb downstream 2.0kb downstream 5833 true Chr02: 41822467-41828299 Glycine max
Glyma.02G230700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41826300-41828299 Glycine max
Glyma.02G230700 5.0kb upstream 5.0kb upstream 8833 true Chr02: 41817467-41826299 Glycine max
Glyma.02G230700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41817467-41822466 Glycine max
Glyma.02G230700 5.0kb downstream 5.0kb downstream 8833 true Chr02: 41822467-41831299 Glycine max
Glyma.02G230700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41826300-41831299 Glycine max
Glyma.02G230700 10.0kb upstream 10.0kb upstream 13833 true Chr02: 41812467-41826299 Glycine max
Glyma.02G230700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41812467-41822466 Glycine max
Glyma.02G230700 10.0kb downstream 10.0kb downstream 13833 true Chr02: 41822467-41836299 Glycine max
Glyma.02G230700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41826300-41836299 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
122299801 5265 Fabidae View MSA
124060836 5270 Rosid View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.43012 0.0 13.6153    
cufflinks 3.28957 0.0 10.6257    
cufflinks 1.14869 0.0 4.15292   Low
cufflinks 3.05976 0.0 9.96986    
cufflinks 3.37482 0.0 10.6609    
cufflinks 2.811 0.0 9.20681    
cufflinks 7.44695 0.0 21.2607   High
cufflinks 3.81008 0.0 12.0748    
cufflinks 2.6233 0.0 8.69031    
cufflinks 0.428        
cufflinks 0.173       Low
cufflinks 0.227        
cufflinks 0.378        
cufflinks 0.593       High
cufflinks 0.543       High
cufflinks 0.436        
cufflinks 0.149       Low
cufflinks 0.417        
cufflinks 0.547       High
cufflinks 0.436        
cufflinks 0.255        
cufflinks 0.507        
cufflinks 0.493        
cufflinks 0.196       Low
cufflinks 0.382        
cufflinks 0.175       Low

0 Strain