Gene : Glyma.02G228600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31342:SF9 - F10K1.18 PROTEIN Genomic Order:  2286
Name:  ? Glyma.02G228600 Secondary Identifier:  ? PAC:30510409
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G228600 0.5kb upstream 0.5kb upstream 2810 true Chr02: 41611205-41614014 Glycine max
Glyma.02G228600 0.5kb upstream 0.5kb upstream 500 false Chr02: 41611205-41611704 Glycine max
Glyma.02G228600 0.5kb downstream 0.5kb downstream 2810 true Chr02: 41611705-41614514 Glycine max
Glyma.02G228600 0.5kb downstream 0.5kb downstream 500 false Chr02: 41614015-41614514 Glycine max
Glyma.02G228600 1.0kb upstream 1.0kb upstream 3310 true Chr02: 41610705-41614014 Glycine max
Glyma.02G228600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41610705-41611704 Glycine max
Glyma.02G228600 1.0kb downstream 1.0kb downstream 3310 true Chr02: 41611705-41615014 Glycine max
Glyma.02G228600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41614015-41615014 Glycine max
Glyma.02G228600 2.0kb upstream 2.0kb upstream 4310 true Chr02: 41609705-41614014 Glycine max
Glyma.02G228600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41609705-41611704 Glycine max
Glyma.02G228600 2.0kb downstream 2.0kb downstream 4310 true Chr02: 41611705-41616014 Glycine max
Glyma.02G228600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41614015-41616014 Glycine max
Glyma.02G228600 5.0kb upstream 5.0kb upstream 7310 true Chr02: 41606705-41614014 Glycine max
Glyma.02G228600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41606705-41611704 Glycine max
Glyma.02G228600 5.0kb downstream 5.0kb downstream 7310 true Chr02: 41611705-41619014 Glycine max
Glyma.02G228600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41614015-41619014 Glycine max
Glyma.02G228600 10.0kb upstream 10.0kb upstream 12310 true Chr02: 41601705-41614014 Glycine max
Glyma.02G228600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41601705-41611704 Glycine max
Glyma.02G228600 10.0kb downstream 10.0kb downstream 12310 true Chr02: 41611705-41624014 Glycine max
Glyma.02G228600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41614015-41624014 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310164 5265 Fabidae View MSA
124060870 5270 Rosid View MSA
123747177 5271 Pentapetalae View MSA
122796256 5272 Eudicot View MSA
122048437 5273 Angiosperm View MSA
121310973 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.438529 0.0 2.81378    
cufflinks 0.30643 0.0 1.53443    
cufflinks 0.304645 0.0 1.53834    
cufflinks 0.931962 0.0 5.26602    
cufflinks 0.184594 0.0 0.7156 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0225986 0.0 0.102887 Low Low
cufflinks 2.48272 0.0 11.0726   High
cufflinks 0.516361 0.0 2.46722    
cufflinks 0.182        
cufflinks 0.017     Low Low
cufflinks 0.195        
cufflinks 0.127        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 1.341       High
cufflinks 0.083        
cufflinks 0.16        
cufflinks 0.194        
cufflinks 1.373       High
cufflinks 0.039     Low  
cufflinks 1.603       High
cufflinks 0.613        
cufflinks 0.012     Low Low
cufflinks 1.531       High
cufflinks 0.035     Low  

0 Strain