Gene : Glyma.02G234600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31301:SF28 - LOB DOMAIN-CONTAINING PROTEIN 13 Genomic Order:  2346
Name:  ? Glyma.02G234600 Secondary Identifier:  ? PAC:30509540
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G234600 0.5kb upstream 0.5kb upstream 1988 true Chr02: 42198893-42200880 Glycine max
Glyma.02G234600 0.5kb upstream 0.5kb upstream 500 false Chr02: 42200381-42200880 Glycine max
Glyma.02G234600 0.5kb downstream 0.5kb downstream 1988 true Chr02: 42198393-42200380 Glycine max
Glyma.02G234600 0.5kb downstream 0.5kb downstream 500 false Chr02: 42198393-42198892 Glycine max
Glyma.02G234600 1.0kb upstream 1.0kb upstream 2488 true Chr02: 42198893-42201380 Glycine max
Glyma.02G234600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42200381-42201380 Glycine max
Glyma.02G234600 1.0kb downstream 1.0kb downstream 2488 true Chr02: 42197893-42200380 Glycine max
Glyma.02G234600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42197893-42198892 Glycine max
Glyma.02G234600 2.0kb upstream 2.0kb upstream 3488 true Chr02: 42198893-42202380 Glycine max
Glyma.02G234600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42200381-42202380 Glycine max
Glyma.02G234600 2.0kb downstream 2.0kb downstream 3488 true Chr02: 42196893-42200380 Glycine max
Glyma.02G234600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42196893-42198892 Glycine max
Glyma.02G234600 5.0kb upstream 5.0kb upstream 6488 true Chr02: 42198893-42205380 Glycine max
Glyma.02G234600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42200381-42205380 Glycine max
Glyma.02G234600 5.0kb downstream 5.0kb downstream 6488 true Chr02: 42193893-42200380 Glycine max
Glyma.02G234600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42193893-42198892 Glycine max
Glyma.02G234600 10.0kb upstream 10.0kb upstream 11488 true Chr02: 42198893-42210380 Glycine max
Glyma.02G234600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42200381-42210380 Glycine max
Glyma.02G234600 10.0kb downstream 10.0kb downstream 11488 true Chr02: 42188893-42200380 Glycine max
Glyma.02G234600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42188893-42198892 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313547 5265 Fabidae View MSA
124067191 5270 Rosid View MSA
123746231 5271 Pentapetalae View MSA
122789083 5272 Eudicot View MSA
122043702 5273 Angiosperm View MSA
121351035 5274 Embryophyte View MSA
123381985 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0226507 0.0 0.117616 Low Low
cufflinks 0.17226 0.0 0.683365 Low  
cufflinks 1.2639 0.0 7.4305    
cufflinks 0.178169 0.0 0.7073    
cufflinks 5.40203 0.0 22.6095    
cufflinks 30.8802 0.0 95.2321 High High
cufflinks 0.23821 0.0 0.93596    
cufflinks 0.402912 0.0 2.01469    
cufflinks 6.73454 0.0 25.9276    
cufflinks 0.05     Low  
cufflinks 3.608       High
cufflinks 0.118     Low  
cufflinks 1.892        
cufflinks 2.494        
cufflinks 0.364        
cufflinks 0.031     Low  
cufflinks 1.638        
cufflinks 0.078     Low  
cufflinks 0.047     Low  
cufflinks 0.006     Low Low
cufflinks 5.484       High
cufflinks 0.031     Low  
cufflinks 0.036     Low  
cufflinks 3.765       High
cufflinks 0.018     Low Low
cufflinks 4.591       High

0 Strain