Gene : Glyma.02G238100 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.4.2.19 - Nicotinate-nucleotide diphosphorylase (carboxylating) / Quinolinate phosphoribosyltransferase (decarboxylating) Genomic Order:  2381
Name:  ? Glyma.02G238100 Secondary Identifier:  ? PAC:30510108
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5653 Glycine max pathologic  
Gmax PYRIDNUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G238100 0.5kb upstream 0.5kb upstream 7954 true Chr02: 42635741-42643694 Glycine max
Glyma.02G238100 0.5kb upstream 0.5kb upstream 500 false Chr02: 42643195-42643694 Glycine max
Glyma.02G238100 0.5kb downstream 0.5kb downstream 7954 true Chr02: 42635241-42643194 Glycine max
Glyma.02G238100 0.5kb downstream 0.5kb downstream 500 false Chr02: 42635241-42635740 Glycine max
Glyma.02G238100 1.0kb upstream 1.0kb upstream 8454 true Chr02: 42635741-42644194 Glycine max
Glyma.02G238100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42643195-42644194 Glycine max
Glyma.02G238100 1.0kb downstream 1.0kb downstream 8454 true Chr02: 42634741-42643194 Glycine max
Glyma.02G238100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42634741-42635740 Glycine max
Glyma.02G238100 2.0kb upstream 2.0kb upstream 9454 true Chr02: 42635741-42645194 Glycine max
Glyma.02G238100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42643195-42645194 Glycine max
Glyma.02G238100 2.0kb downstream 2.0kb downstream 9454 true Chr02: 42633741-42643194 Glycine max
Glyma.02G238100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42633741-42635740 Glycine max
Glyma.02G238100 5.0kb upstream 5.0kb upstream 12454 true Chr02: 42635741-42648194 Glycine max
Glyma.02G238100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42643195-42648194 Glycine max
Glyma.02G238100 5.0kb downstream 5.0kb downstream 12454 true Chr02: 42630741-42643194 Glycine max
Glyma.02G238100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42630741-42635740 Glycine max
Glyma.02G238100 10.0kb upstream 10.0kb upstream 17454 true Chr02: 42635741-42653194 Glycine max
Glyma.02G238100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42643195-42653194 Glycine max
Glyma.02G238100 10.0kb downstream 10.0kb downstream 17454 true Chr02: 42625741-42643194 Glycine max
Glyma.02G238100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42625741-42635740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026837 5273 Angiosperm View MSA
122301296 5265 Fabidae View MSA
124067414 5270 Rosid View MSA
123740298 5271 Pentapetalae View MSA
122790816 5272 Eudicot View MSA
121346230 5274 Embryophyte View MSA
123424244 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9804 0.0 90.2875    
cufflinks 17.726 0.0 74.2057    
cufflinks 23.1696 0.0 94.2506 High High
cufflinks 21.5601 0.0 98.5881 High High
cufflinks 12.4305 0.0 61.7556    
cufflinks 9.72754 0.0 46.988   Low
cufflinks 13.086 0.0 55.4456    
cufflinks 12.4726 0.0 58.539    
cufflinks 17.8807 0.0 84.5769    
cufflinks 0.697        
cufflinks 0.712        
cufflinks 1.162        
cufflinks 0.58        
cufflinks 0.573        
cufflinks 1.133        
cufflinks 1.302        
cufflinks 0.334       Low
cufflinks 1.263        
cufflinks 0.727        
cufflinks 1.577       High
cufflinks 0.632        
cufflinks 1.518       High
cufflinks 1.285        
cufflinks 0.693        
cufflinks 1.57       High
cufflinks 0.343       Low

0 Strain