Gene : Glyma.02G235900 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  2359
Name:  ? Glyma.02G235900 Secondary Identifier:  ? PAC:30506531
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G235900 0.5kb upstream 0.5kb upstream 3638 true Chr02: 42337774-42341411 Glycine max
Glyma.02G235900 0.5kb upstream 0.5kb upstream 500 false Chr02: 42340912-42341411 Glycine max
Glyma.02G235900 0.5kb downstream 0.5kb downstream 3638 true Chr02: 42337274-42340911 Glycine max
Glyma.02G235900 0.5kb downstream 0.5kb downstream 500 false Chr02: 42337274-42337773 Glycine max
Glyma.02G235900 1.0kb upstream 1.0kb upstream 4138 true Chr02: 42337774-42341911 Glycine max
Glyma.02G235900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42340912-42341911 Glycine max
Glyma.02G235900 1.0kb downstream 1.0kb downstream 4138 true Chr02: 42336774-42340911 Glycine max
Glyma.02G235900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42336774-42337773 Glycine max
Glyma.02G235900 2.0kb upstream 2.0kb upstream 5138 true Chr02: 42337774-42342911 Glycine max
Glyma.02G235900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42340912-42342911 Glycine max
Glyma.02G235900 2.0kb downstream 2.0kb downstream 5138 true Chr02: 42335774-42340911 Glycine max
Glyma.02G235900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42335774-42337773 Glycine max
Glyma.02G235900 5.0kb upstream 5.0kb upstream 8138 true Chr02: 42337774-42345911 Glycine max
Glyma.02G235900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42340912-42345911 Glycine max
Glyma.02G235900 5.0kb downstream 5.0kb downstream 8138 true Chr02: 42332774-42340911 Glycine max
Glyma.02G235900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42332774-42337773 Glycine max
Glyma.02G235900 10.0kb upstream 10.0kb upstream 13138 true Chr02: 42337774-42350911 Glycine max
Glyma.02G235900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42340912-42350911 Glycine max
Glyma.02G235900 10.0kb downstream 10.0kb downstream 13138 true Chr02: 42327774-42340911 Glycine max
Glyma.02G235900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42327774-42337773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310468 5265 Fabidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0709053 0.0 0.288855 Low Low
cufflinks 0.496601 0.0 1.86809    
cufflinks 0.348996 0.0 1.33199    
cufflinks 0.198243 0.0 0.775259    
cufflinks 0.707563 0.0 2.61764    
cufflinks 0.912283 0.0 3.32535   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.659036 0.0 2.44506    
cufflinks 0.210231 0.0 0.820636 Low  
cufflinks 5.539       High
cufflinks 0.025     Low Low
cufflinks 0.928        
cufflinks 0.645        
cufflinks 0.755        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.723        
cufflinks 0.02     Low Low
cufflinks 6.171       High
cufflinks 0.246        
cufflinks 2.111        
cufflinks 0.064        
cufflinks 2.323        
cufflinks 0.502        
cufflinks 0.023     Low Low
cufflinks 3.533       High
cufflinks 0.052     Low Low

0 Strain