Gene : Glyma.02G240500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31989:SF6 - F12P19.8 PROTEIN Genomic Order:  2405
Name:  ? Glyma.02G240500 Secondary Identifier:  ? PAC:30509991
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G240500 0.5kb upstream 0.5kb upstream 5176 true Chr02: 42900252-42905427 Glycine max
Glyma.02G240500 0.5kb upstream 0.5kb upstream 500 false Chr02: 42904928-42905427 Glycine max
Glyma.02G240500 0.5kb downstream 0.5kb downstream 5176 true Chr02: 42899752-42904927 Glycine max
Glyma.02G240500 0.5kb downstream 0.5kb downstream 500 false Chr02: 42899752-42900251 Glycine max
Glyma.02G240500 1.0kb upstream 1.0kb upstream 5676 true Chr02: 42900252-42905927 Glycine max
Glyma.02G240500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42904928-42905927 Glycine max
Glyma.02G240500 1.0kb downstream 1.0kb downstream 5676 true Chr02: 42899252-42904927 Glycine max
Glyma.02G240500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42899252-42900251 Glycine max
Glyma.02G240500 2.0kb upstream 2.0kb upstream 6676 true Chr02: 42900252-42906927 Glycine max
Glyma.02G240500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42904928-42906927 Glycine max
Glyma.02G240500 2.0kb downstream 2.0kb downstream 6676 true Chr02: 42898252-42904927 Glycine max
Glyma.02G240500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42898252-42900251 Glycine max
Glyma.02G240500 5.0kb upstream 5.0kb upstream 9676 true Chr02: 42900252-42909927 Glycine max
Glyma.02G240500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42904928-42909927 Glycine max
Glyma.02G240500 5.0kb downstream 5.0kb downstream 9676 true Chr02: 42895252-42904927 Glycine max
Glyma.02G240500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42895252-42900251 Glycine max
Glyma.02G240500 10.0kb upstream 10.0kb upstream 14676 true Chr02: 42900252-42914927 Glycine max
Glyma.02G240500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42904928-42914927 Glycine max
Glyma.02G240500 10.0kb downstream 10.0kb downstream 14676 true Chr02: 42890252-42904927 Glycine max
Glyma.02G240500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42890252-42900251 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311806 5265 Fabidae View MSA
124065157 5270 Rosid View MSA
123749136 5271 Pentapetalae View MSA
122793090 5272 Eudicot View MSA
122045532 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0785877 0.0 0.311319 Low Low
cufflinks 0.690319 0.0 2.46645    
cufflinks 0.478388 0.0 1.74543    
cufflinks 0.318436 0.0 1.18878    
cufflinks 0.683348 0.0 2.44695    
cufflinks 0.328357 0.0 1.22524    
cufflinks 0.294467 0.0 1.10493    
cufflinks 0.652591 0.0 2.33981    
cufflinks 0.852854 0.0 3.00018   High
cufflinks 0.918        
cufflinks 1.098       High
cufflinks 0.392        
cufflinks 0.674        
cufflinks 0.369        
cufflinks 0.11       Low
cufflinks 0.474        
cufflinks 0.727        
cufflinks 0.982        
cufflinks 0.313       Low
cufflinks 0.628        
cufflinks 1.314       High
cufflinks 0.617        
cufflinks 0.339        
cufflinks 0.77        
cufflinks 0.626        
cufflinks 0.871        

0 Strain