Gene : Glyma.19G040800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13316 - ZINC FINGER, CCHC DOMAIN CONTAINING 8 Genomic Order:  408
Name:  ? Glyma.19G040800 Secondary Identifier:  ? PAC:30514458
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G040800 0.5kb upstream 0.5kb upstream 11463 true Chr19: 5870783-5882245 Glycine max
Glyma.19G040800 0.5kb upstream 0.5kb upstream 500 false Chr19: 5870783-5871282 Glycine max
Glyma.19G040800 0.5kb downstream 0.5kb downstream 11463 true Chr19: 5871283-5882745 Glycine max
Glyma.19G040800 0.5kb downstream 0.5kb downstream 500 false Chr19: 5882246-5882745 Glycine max
Glyma.19G040800 1.0kb upstream 1.0kb upstream 11963 true Chr19: 5870283-5882245 Glycine max
Glyma.19G040800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 5870283-5871282 Glycine max
Glyma.19G040800 1.0kb downstream 1.0kb downstream 11963 true Chr19: 5871283-5883245 Glycine max
Glyma.19G040800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 5882246-5883245 Glycine max
Glyma.19G040800 2.0kb upstream 2.0kb upstream 12963 true Chr19: 5869283-5882245 Glycine max
Glyma.19G040800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 5869283-5871282 Glycine max
Glyma.19G040800 2.0kb downstream 2.0kb downstream 12963 true Chr19: 5871283-5884245 Glycine max
Glyma.19G040800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 5882246-5884245 Glycine max
Glyma.19G040800 5.0kb upstream 5.0kb upstream 15963 true Chr19: 5866283-5882245 Glycine max
Glyma.19G040800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 5866283-5871282 Glycine max
Glyma.19G040800 5.0kb downstream 5.0kb downstream 15963 true Chr19: 5871283-5887245 Glycine max
Glyma.19G040800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 5882246-5887245 Glycine max
Glyma.19G040800 10.0kb upstream 10.0kb upstream 20963 true Chr19: 5861283-5882245 Glycine max
Glyma.19G040800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 5861283-5871282 Glycine max
Glyma.19G040800 10.0kb downstream 10.0kb downstream 20963 true Chr19: 5871283-5892245 Glycine max
Glyma.19G040800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 5882246-5892245 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306367 5265 Fabidae View MSA
124060877 5270 Rosid View MSA
123753433 5271 Pentapetalae View MSA
122793769 5272 Eudicot View MSA
122044061 5273 Angiosperm View MSA
121350555 5274 Embryophyte View MSA
123424500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.12443 0.0 15.082    
cufflinks 5.87698 0.0 19.5556   High
cufflinks 4.37086 0.0 15.034    
cufflinks 5.25583 0.0 17.4053    
cufflinks 4.32422 0.0 15.0527    
cufflinks 2.86768 0.0 11.2682   Low
cufflinks 6.5338 0.0 24.0096   High
cufflinks 4.323 0.0 14.9756    
cufflinks 3.63192 0.0 13.251    
cufflinks 0.342        
cufflinks 0.239       Low
cufflinks 0.552        
cufflinks 0.382        
cufflinks 0.411        
cufflinks 0.348        
cufflinks 0.717       High
cufflinks 0.2       Low
cufflinks 0.6        
cufflinks 0.67        
cufflinks 0.737       High
cufflinks 0.323        
cufflinks 0.705       High
cufflinks 0.656        
cufflinks 0.281        
cufflinks 0.707       High
cufflinks 0.227       Low

0 Strain