Gene : Glyma.02G242000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12925:SF0 - PROTEIN HIKESHI Genomic Order:  2420
Name:  ? Glyma.02G242000 Secondary Identifier:  ? PAC:30509495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G242000 0.5kb upstream 0.5kb upstream 1740 true Chr02: 43046463-43048202 Glycine max
Glyma.02G242000 0.5kb upstream 0.5kb upstream 500 false Chr02: 43046463-43046962 Glycine max
Glyma.02G242000 0.5kb downstream 0.5kb downstream 1740 true Chr02: 43046963-43048702 Glycine max
Glyma.02G242000 0.5kb downstream 0.5kb downstream 500 false Chr02: 43048203-43048702 Glycine max
Glyma.02G242000 1.0kb upstream 1.0kb upstream 2240 true Chr02: 43045963-43048202 Glycine max
Glyma.02G242000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43045963-43046962 Glycine max
Glyma.02G242000 1.0kb downstream 1.0kb downstream 2240 true Chr02: 43046963-43049202 Glycine max
Glyma.02G242000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43048203-43049202 Glycine max
Glyma.02G242000 2.0kb upstream 2.0kb upstream 3240 true Chr02: 43044963-43048202 Glycine max
Glyma.02G242000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43044963-43046962 Glycine max
Glyma.02G242000 2.0kb downstream 2.0kb downstream 3240 true Chr02: 43046963-43050202 Glycine max
Glyma.02G242000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43048203-43050202 Glycine max
Glyma.02G242000 5.0kb upstream 5.0kb upstream 6240 true Chr02: 43041963-43048202 Glycine max
Glyma.02G242000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43041963-43046962 Glycine max
Glyma.02G242000 5.0kb downstream 5.0kb downstream 6240 true Chr02: 43046963-43053202 Glycine max
Glyma.02G242000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43048203-43053202 Glycine max
Glyma.02G242000 10.0kb upstream 10.0kb upstream 11240 true Chr02: 43036963-43048202 Glycine max
Glyma.02G242000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43036963-43046962 Glycine max
Glyma.02G242000 10.0kb downstream 10.0kb downstream 11240 true Chr02: 43046963-43058202 Glycine max
Glyma.02G242000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43048203-43058202 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301597 5265 Fabidae View MSA
124064683 5270 Rosid View MSA
123740283 5271 Pentapetalae View MSA
122791850 5272 Eudicot View MSA
122044077 5273 Angiosperm View MSA
121345488 5274 Embryophyte View MSA
123425277 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.06723 0.0 15.7415   Low
cufflinks 8.36319 0.0 24.3605    
cufflinks 5.04289 0.0 15.8837   Low
cufflinks 7.5996 0.0 22.4232    
cufflinks 9.5439 0.0 27.0413   High
cufflinks 6.18776 0.0 18.6271    
cufflinks 7.45252 0.0 21.8477    
cufflinks 7.74336 0.0 22.7977    
cufflinks 10.7303 0.0 30.2181   High
cufflinks 2.827        
cufflinks 3.839        
cufflinks 3.934        
cufflinks 3.744        
cufflinks 5.129       High
cufflinks 4.485        
cufflinks 3.18        
cufflinks 1.658       Low
cufflinks 5.009       High
cufflinks 3.793        
cufflinks 3.114        
cufflinks 3.558        
cufflinks 3.185        
cufflinks 4.145        
cufflinks 2.476       Low
cufflinks 3.068        
cufflinks 3.274        

0 Strain