Gene : Glyma.03G042800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11615//PTHR11615:SF144 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  428
Name:  ? Glyma.03G042800 Secondary Identifier:  ? PAC:30519209
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G042800 0.5kb upstream 0.5kb upstream 8881 true Chr03: 5409465-5418345 Glycine max
Glyma.03G042800 0.5kb upstream 0.5kb upstream 500 false Chr03: 5417846-5418345 Glycine max
Glyma.03G042800 0.5kb downstream 0.5kb downstream 8881 true Chr03: 5408965-5417845 Glycine max
Glyma.03G042800 0.5kb downstream 0.5kb downstream 500 false Chr03: 5408965-5409464 Glycine max
Glyma.03G042800 1.0kb upstream 1.0kb upstream 9381 true Chr03: 5409465-5418845 Glycine max
Glyma.03G042800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5417846-5418845 Glycine max
Glyma.03G042800 1.0kb downstream 1.0kb downstream 9381 true Chr03: 5408465-5417845 Glycine max
Glyma.03G042800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5408465-5409464 Glycine max
Glyma.03G042800 2.0kb upstream 2.0kb upstream 10381 true Chr03: 5409465-5419845 Glycine max
Glyma.03G042800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5417846-5419845 Glycine max
Glyma.03G042800 2.0kb downstream 2.0kb downstream 10381 true Chr03: 5407465-5417845 Glycine max
Glyma.03G042800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5407465-5409464 Glycine max
Glyma.03G042800 5.0kb upstream 5.0kb upstream 13381 true Chr03: 5409465-5422845 Glycine max
Glyma.03G042800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5417846-5422845 Glycine max
Glyma.03G042800 5.0kb downstream 5.0kb downstream 13381 true Chr03: 5404465-5417845 Glycine max
Glyma.03G042800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5404465-5409464 Glycine max
Glyma.03G042800 10.0kb upstream 10.0kb upstream 18381 true Chr03: 5409465-5427845 Glycine max
Glyma.03G042800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5417846-5427845 Glycine max
Glyma.03G042800 10.0kb downstream 10.0kb downstream 18381 true Chr03: 5399465-5417845 Glycine max
Glyma.03G042800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5399465-5409464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254491 5265 Fabidae View MSA
124068306 5270 Rosid View MSA
123750880 5271 Pentapetalae View MSA
122792969 5272 Eudicot View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00332184 0.0 0.0150231 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0105602 0.0 0.0435665 Low  
cufflinks 0.00722155 0.0 0.0305744 Low  
cufflinks 2.5331 0.0 6.89934   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00326037 0.0 0.0147563 Low  
cufflinks 13.9775 0.0 39.6853   High
cufflinks 0.009     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 35.142     High High
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.002     Low  
cufflinks 0.01     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  

0 Strain