Gene : Glyma.03G042600 G. max Wm82.a2.v1
Defline:  (1 of 26) PF13516 - Leucine Rich repeat (LRR_6) Genomic Order:  426
Name:  ? Glyma.03G042600 Secondary Identifier:  ? PAC:30516457
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G042600 0.5kb upstream 0.5kb upstream 5618 true Chr03: 5392667-5398284 Glycine max
Glyma.03G042600 0.5kb upstream 0.5kb upstream 500 false Chr03: 5392667-5393166 Glycine max
Glyma.03G042600 0.5kb downstream 0.5kb downstream 5618 true Chr03: 5393167-5398784 Glycine max
Glyma.03G042600 0.5kb downstream 0.5kb downstream 500 false Chr03: 5398285-5398784 Glycine max
Glyma.03G042600 1.0kb upstream 1.0kb upstream 6118 true Chr03: 5392167-5398284 Glycine max
Glyma.03G042600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5392167-5393166 Glycine max
Glyma.03G042600 1.0kb downstream 1.0kb downstream 6118 true Chr03: 5393167-5399284 Glycine max
Glyma.03G042600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5398285-5399284 Glycine max
Glyma.03G042600 2.0kb upstream 2.0kb upstream 7118 true Chr03: 5391167-5398284 Glycine max
Glyma.03G042600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5391167-5393166 Glycine max
Glyma.03G042600 2.0kb downstream 2.0kb downstream 7118 true Chr03: 5393167-5400284 Glycine max
Glyma.03G042600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5398285-5400284 Glycine max
Glyma.03G042600 5.0kb upstream 5.0kb upstream 10118 true Chr03: 5388167-5398284 Glycine max
Glyma.03G042600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5388167-5393166 Glycine max
Glyma.03G042600 5.0kb downstream 5.0kb downstream 10118 true Chr03: 5393167-5403284 Glycine max
Glyma.03G042600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5398285-5403284 Glycine max
Glyma.03G042600 10.0kb upstream 10.0kb upstream 15118 true Chr03: 5383167-5398284 Glycine max
Glyma.03G042600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5383167-5393166 Glycine max
Glyma.03G042600 10.0kb downstream 10.0kb downstream 15118 true Chr03: 5393167-5408284 Glycine max
Glyma.03G042600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5398285-5408284 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305920 5265 Fabidae View MSA
124071815 5270 Rosid View MSA
123740566 5271 Pentapetalae View MSA
122791928 5272 Eudicot View MSA
122041670 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121346747 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.61749 0.0 15.3587    
cufflinks 3.70495 0.0 10.5234    
cufflinks 5.21392 0.0 14.3295    
cufflinks 1.77272 0.0 5.55711   Low
cufflinks 4.03853 0.0 11.3428    
cufflinks 5.37653 0.0 14.731    
cufflinks 4.00366 0.0 11.2769    
cufflinks 4.85121 0.0 13.4169    
cufflinks 6.175 0.0 16.7661    
cufflinks 5.554        
cufflinks 21.54     High High
cufflinks 3.645        
cufflinks 3.568        
cufflinks 1.326       Low
cufflinks 22.662     High High
cufflinks 3.803        
cufflinks 11.114     High  
cufflinks 2.746        
cufflinks 3.19        
cufflinks 3.389        
cufflinks 18.968     High High
cufflinks 3.388        
cufflinks 3.942        
cufflinks 18.099     High High
cufflinks 3.56        
cufflinks 11.707     High  

0 Strain