Gene : Glyma.03G041200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  412
Name:  ? Glyma.03G041200 Secondary Identifier:  ? PAC:30515607
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G041200 0.5kb upstream 0.5kb upstream 4189 true Chr03: 5208023-5212211 Glycine max
Glyma.03G041200 0.5kb upstream 0.5kb upstream 500 false Chr03: 5208023-5208522 Glycine max
Glyma.03G041200 0.5kb downstream 0.5kb downstream 4189 true Chr03: 5208523-5212711 Glycine max
Glyma.03G041200 0.5kb downstream 0.5kb downstream 500 false Chr03: 5212212-5212711 Glycine max
Glyma.03G041200 1.0kb upstream 1.0kb upstream 4689 true Chr03: 5207523-5212211 Glycine max
Glyma.03G041200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5207523-5208522 Glycine max
Glyma.03G041200 1.0kb downstream 1.0kb downstream 4689 true Chr03: 5208523-5213211 Glycine max
Glyma.03G041200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5212212-5213211 Glycine max
Glyma.03G041200 2.0kb upstream 2.0kb upstream 5689 true Chr03: 5206523-5212211 Glycine max
Glyma.03G041200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5206523-5208522 Glycine max
Glyma.03G041200 2.0kb downstream 2.0kb downstream 5689 true Chr03: 5208523-5214211 Glycine max
Glyma.03G041200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5212212-5214211 Glycine max
Glyma.03G041200 5.0kb upstream 5.0kb upstream 8689 true Chr03: 5203523-5212211 Glycine max
Glyma.03G041200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5203523-5208522 Glycine max
Glyma.03G041200 5.0kb downstream 5.0kb downstream 8689 true Chr03: 5208523-5217211 Glycine max
Glyma.03G041200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5212212-5217211 Glycine max
Glyma.03G041200 10.0kb upstream 10.0kb upstream 13689 true Chr03: 5198523-5212211 Glycine max
Glyma.03G041200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5198523-5208522 Glycine max
Glyma.03G041200 10.0kb downstream 10.0kb downstream 13689 true Chr03: 5208523-5222211 Glycine max
Glyma.03G041200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5212212-5222211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656582 5273 Angiosperm View MSA
122312993 5265 Fabidae View MSA
124036763 5270 Rosid View MSA
123610002 5271 Pentapetalae View MSA
122644636 5272 Eudicot View MSA
120928654 5274 Embryophyte View MSA
122969249 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.40283 0.0 4.79529   High
cufflinks 0.259464 0.0 0.985207    
cufflinks 0.190584 0.0 0.734354    
cufflinks 0.114128 0.0 0.449643 Low  
cufflinks 0.0444706 0.0 0.181819 Low Low
cufflinks 0.523714 0.0 1.93008    
cufflinks 0.938293 0.0 3.32135   High
cufflinks 0.357588 0.0 1.34134    
cufflinks 0.374        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.214        
cufflinks 0.048     Low  
cufflinks 0.031     Low  
cufflinks 0.006     Low Low
cufflinks 0.615        
cufflinks 0.066     Low  
cufflinks 0.214        
cufflinks 0.956       High
cufflinks 0.349        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.587        
cufflinks 0.856       High
cufflinks 0.005     Low Low
cufflinks 0.501        
cufflinks 0.054     Low  

0 Strain