Gene : Glyma.03G049700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11599:SF13 - PROTEASOME SUBUNIT ALPHA TYPE-4 Genomic Order:  497
Name:  ? Glyma.03G049700 Secondary Identifier:  ? PAC:30515471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G049700 0.5kb upstream 0.5kb upstream 3860 true Chr03: 6485060-6488919 Glycine max
Glyma.03G049700 0.5kb upstream 0.5kb upstream 500 false Chr03: 6485060-6485559 Glycine max
Glyma.03G049700 0.5kb downstream 0.5kb downstream 3860 true Chr03: 6485560-6489419 Glycine max
Glyma.03G049700 0.5kb downstream 0.5kb downstream 500 false Chr03: 6488920-6489419 Glycine max
Glyma.03G049700 1.0kb upstream 1.0kb upstream 4360 true Chr03: 6484560-6488919 Glycine max
Glyma.03G049700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6484560-6485559 Glycine max
Glyma.03G049700 1.0kb downstream 1.0kb downstream 4360 true Chr03: 6485560-6489919 Glycine max
Glyma.03G049700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6488920-6489919 Glycine max
Glyma.03G049700 2.0kb upstream 2.0kb upstream 5360 true Chr03: 6483560-6488919 Glycine max
Glyma.03G049700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6483560-6485559 Glycine max
Glyma.03G049700 2.0kb downstream 2.0kb downstream 5360 true Chr03: 6485560-6490919 Glycine max
Glyma.03G049700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6488920-6490919 Glycine max
Glyma.03G049700 5.0kb upstream 5.0kb upstream 8360 true Chr03: 6480560-6488919 Glycine max
Glyma.03G049700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6480560-6485559 Glycine max
Glyma.03G049700 5.0kb downstream 5.0kb downstream 8360 true Chr03: 6485560-6493919 Glycine max
Glyma.03G049700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6488920-6493919 Glycine max
Glyma.03G049700 10.0kb upstream 10.0kb upstream 13360 true Chr03: 6475560-6488919 Glycine max
Glyma.03G049700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6475560-6485559 Glycine max
Glyma.03G049700 10.0kb downstream 10.0kb downstream 13360 true Chr03: 6485560-6498919 Glycine max
Glyma.03G049700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6488920-6498919 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311313 5265 Fabidae View MSA
124065392 5270 Rosid View MSA
123752544 5271 Pentapetalae View MSA
122786754 5272 Eudicot View MSA
122049144 5273 Angiosperm View MSA
121351432 5274 Embryophyte View MSA
123426590 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.6665 0.0 79.3541 High  
cufflinks 21.7526 0.0 69.0081 High  
cufflinks 24.9158 0.0 76.6503 High  
cufflinks 21.1859 0.0 66.4627 High  
cufflinks 31.3352 0.0 97.0713 High  
cufflinks 49.8616 0.0 153.727 High High
cufflinks 16.9314 0.0 54.7202   Low
cufflinks 28.4681 0.0 89.0491 High  
cufflinks 25.3298 0.0 80.051 High  
cufflinks 4.611        
cufflinks 4.618        
cufflinks 4.379        
cufflinks 7.686     High High
cufflinks 8.326     High High
cufflinks 2.621       Low
cufflinks 3.011        
cufflinks 3.102        
cufflinks 3.622        
cufflinks 4.194        
cufflinks 2.301       Low
cufflinks 4.19        
cufflinks 2.838        
cufflinks 3.649        
cufflinks 5.073        
cufflinks 2.512       Low
cufflinks 4.013        

0 Strain