Gene : Glyma.03G052200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30289 - UNCHARACTERIZED PROTEIN YBCL-RELATED Genomic Order:  522
Name:  ? Glyma.03G052200 Secondary Identifier:  ? PAC:30517544
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G052200 0.5kb upstream 0.5kb upstream 3680 true Chr03: 6902165-6905844 Glycine max
Glyma.03G052200 0.5kb upstream 0.5kb upstream 500 false Chr03: 6905345-6905844 Glycine max
Glyma.03G052200 0.5kb downstream 0.5kb downstream 3680 true Chr03: 6901665-6905344 Glycine max
Glyma.03G052200 0.5kb downstream 0.5kb downstream 500 false Chr03: 6901665-6902164 Glycine max
Glyma.03G052200 1.0kb upstream 1.0kb upstream 4180 true Chr03: 6902165-6906344 Glycine max
Glyma.03G052200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6905345-6906344 Glycine max
Glyma.03G052200 1.0kb downstream 1.0kb downstream 4180 true Chr03: 6901165-6905344 Glycine max
Glyma.03G052200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6901165-6902164 Glycine max
Glyma.03G052200 2.0kb upstream 2.0kb upstream 5180 true Chr03: 6902165-6907344 Glycine max
Glyma.03G052200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6905345-6907344 Glycine max
Glyma.03G052200 2.0kb downstream 2.0kb downstream 5180 true Chr03: 6900165-6905344 Glycine max
Glyma.03G052200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6900165-6902164 Glycine max
Glyma.03G052200 5.0kb upstream 5.0kb upstream 8180 true Chr03: 6902165-6910344 Glycine max
Glyma.03G052200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6905345-6910344 Glycine max
Glyma.03G052200 5.0kb downstream 5.0kb downstream 8180 true Chr03: 6897165-6905344 Glycine max
Glyma.03G052200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6897165-6902164 Glycine max
Glyma.03G052200 10.0kb upstream 10.0kb upstream 13180 true Chr03: 6902165-6915344 Glycine max
Glyma.03G052200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6905345-6915344 Glycine max
Glyma.03G052200 10.0kb downstream 10.0kb downstream 13180 true Chr03: 6892165-6905344 Glycine max
Glyma.03G052200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6892165-6902164 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306207 5265 Fabidae View MSA
124060510 5270 Rosid View MSA
123747154 5271 Pentapetalae View MSA
122791921 5272 Eudicot View MSA
122050615 5273 Angiosperm View MSA
121346096 5274 Embryophyte View MSA
123380328 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0161438 0.0 0.0730106 Low Low
cufflinks 0.34793 0.0 1.32489    
cufflinks 1.28969 0.0 4.56476    
cufflinks 0.0878355 0.0 0.352983 Low Low
cufflinks 0.837681 0.0 3.05188    
cufflinks 2.3316 0.0 7.7809    
cufflinks 6.50003 0.0 18.8519   High
cufflinks 0.609316 0.0 2.2606    
cufflinks 1.29425 0.0 4.57888    
cufflinks 0.717        
cufflinks 0.527        
cufflinks 0.859        
cufflinks 0.61        
cufflinks 0.103        
cufflinks 0.664        
cufflinks 0.046     Low  
cufflinks 1.67       High
cufflinks 1.511       High
cufflinks 0.1     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.225        
cufflinks 0.007     Low Low
cufflinks 0.037     Low Low
cufflinks 0.229        
cufflinks 0.014     Low Low
cufflinks 0.617        

0 Strain