Gene : Glyma.03G050500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13234:SF8 - GAMMA-INTERFERON-INDUCIBLE LYSOSOMAL THIOL REDUCTASE Genomic Order:  505
Name:  ? Glyma.03G050500 Secondary Identifier:  ? PAC:30518588
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G050500 0.5kb upstream 0.5kb upstream 4822 true Chr03: 6589026-6593847 Glycine max
Glyma.03G050500 0.5kb upstream 0.5kb upstream 500 false Chr03: 6589026-6589525 Glycine max
Glyma.03G050500 0.5kb downstream 0.5kb downstream 4822 true Chr03: 6589526-6594347 Glycine max
Glyma.03G050500 0.5kb downstream 0.5kb downstream 500 false Chr03: 6593848-6594347 Glycine max
Glyma.03G050500 1.0kb upstream 1.0kb upstream 5322 true Chr03: 6588526-6593847 Glycine max
Glyma.03G050500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6588526-6589525 Glycine max
Glyma.03G050500 1.0kb downstream 1.0kb downstream 5322 true Chr03: 6589526-6594847 Glycine max
Glyma.03G050500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6593848-6594847 Glycine max
Glyma.03G050500 2.0kb upstream 2.0kb upstream 6322 true Chr03: 6587526-6593847 Glycine max
Glyma.03G050500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6587526-6589525 Glycine max
Glyma.03G050500 2.0kb downstream 2.0kb downstream 6322 true Chr03: 6589526-6595847 Glycine max
Glyma.03G050500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6593848-6595847 Glycine max
Glyma.03G050500 5.0kb upstream 5.0kb upstream 9322 true Chr03: 6584526-6593847 Glycine max
Glyma.03G050500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6584526-6589525 Glycine max
Glyma.03G050500 5.0kb downstream 5.0kb downstream 9322 true Chr03: 6589526-6598847 Glycine max
Glyma.03G050500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6593848-6598847 Glycine max
Glyma.03G050500 10.0kb upstream 10.0kb upstream 14322 true Chr03: 6579526-6593847 Glycine max
Glyma.03G050500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6579526-6589525 Glycine max
Glyma.03G050500 10.0kb downstream 10.0kb downstream 14322 true Chr03: 6589526-6603847 Glycine max
Glyma.03G050500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6593848-6603847 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304112 5265 Fabidae View MSA
124069226 5270 Rosid View MSA
123753662 5271 Pentapetalae View MSA
122787690 5272 Eudicot View MSA
122043804 5273 Angiosperm View MSA
121344699 5274 Embryophyte View MSA
123427496 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.412976 0.0 2.04076    
cufflinks 10.081 0.0 43.2537   High
cufflinks 0.375496 0.0 1.45169   Low
cufflinks 0.708186 0.0 3.50026    
cufflinks 2.60156 0.0 14.6841    
cufflinks 2.99322 0.0 11.8427    
cufflinks 4.93087 0.0 17.0088   High
cufflinks 0.784232 0.0 3.85102    
cufflinks 0.369985 0.0 1.80603   Low
cufflinks 0.3        
cufflinks 0.007     Low Low
cufflinks 0.1     Low  
cufflinks 0.152        
cufflinks 0.344        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.522        
cufflinks 0.007     Low Low
cufflinks 0.211        
cufflinks 0.802       High
cufflinks 0.656        
cufflinks 0.017     Low Low
cufflinks 0.645        
cufflinks 0.705        
cufflinks 0.011     Low Low
cufflinks 0.641        
cufflinks 0.018     Low Low

0 Strain