Gene : Glyma.19G083500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33269:SF3 - NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT 6, CHLOROPLASTIC Genomic Order:  835
Name:  ? Glyma.19G083500 Secondary Identifier:  ? PAC:30514577
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G083500 0.5kb upstream 0.5kb upstream 1946 true Chr19: 30144985-30146930 Glycine max
Glyma.19G083500 0.5kb upstream 0.5kb upstream 500 false Chr19: 30146431-30146930 Glycine max
Glyma.19G083500 0.5kb downstream 0.5kb downstream 1946 true Chr19: 30144485-30146430 Glycine max
Glyma.19G083500 0.5kb downstream 0.5kb downstream 500 false Chr19: 30144485-30144984 Glycine max
Glyma.19G083500 1.0kb upstream 1.0kb upstream 2446 true Chr19: 30144985-30147430 Glycine max
Glyma.19G083500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 30146431-30147430 Glycine max
Glyma.19G083500 1.0kb downstream 1.0kb downstream 2446 true Chr19: 30143985-30146430 Glycine max
Glyma.19G083500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 30143985-30144984 Glycine max
Glyma.19G083500 2.0kb upstream 2.0kb upstream 3446 true Chr19: 30144985-30148430 Glycine max
Glyma.19G083500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 30146431-30148430 Glycine max
Glyma.19G083500 2.0kb downstream 2.0kb downstream 3446 true Chr19: 30142985-30146430 Glycine max
Glyma.19G083500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 30142985-30144984 Glycine max
Glyma.19G083500 5.0kb upstream 5.0kb upstream 6446 true Chr19: 30144985-30151430 Glycine max
Glyma.19G083500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 30146431-30151430 Glycine max
Glyma.19G083500 5.0kb downstream 5.0kb downstream 6446 true Chr19: 30139985-30146430 Glycine max
Glyma.19G083500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 30139985-30144984 Glycine max
Glyma.19G083500 10.0kb upstream 10.0kb upstream 11446 true Chr19: 30144985-30156430 Glycine max
Glyma.19G083500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 30146431-30156430 Glycine max
Glyma.19G083500 10.0kb downstream 10.0kb downstream 11446 true Chr19: 30134985-30146430 Glycine max
Glyma.19G083500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 30134985-30144984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028673 5273 Angiosperm View MSA
122247555 5265 Fabidae Singleton cluster - no MSA
124038188 5270 Rosid View MSA
123751111 5271 Pentapetalae View MSA
122797578 5272 Eudicot View MSA
121298125 5274 Embryophyte View MSA
123336120 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.5985 0.0 6.26012    
cufflinks 0.141456 0.0 0.641506 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.6754 0.0 44.3658   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.531581 0.0 2.17338    
cufflinks 6.51184 0.0 23.9086    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.033     Low  
cufflinks 0.018     Low  
cufflinks 0.053     Low  
cufflinks 0.061     Low  
cufflinks 0.012     Low Low
cufflinks 0.053     Low  
cufflinks 0.203       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain