Gene : Glyma.03G058500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Genomic Order:  585
Name:  ? Glyma.03G058500 Secondary Identifier:  ? PAC:30518457
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G058500 0.5kb upstream 0.5kb upstream 5452 true Chr03: 8326545-8331996 Glycine max
Glyma.03G058500 0.5kb upstream 0.5kb upstream 500 false Chr03: 8326545-8327044 Glycine max
Glyma.03G058500 0.5kb downstream 0.5kb downstream 5452 true Chr03: 8327045-8332496 Glycine max
Glyma.03G058500 0.5kb downstream 0.5kb downstream 500 false Chr03: 8331997-8332496 Glycine max
Glyma.03G058500 1.0kb upstream 1.0kb upstream 5952 true Chr03: 8326045-8331996 Glycine max
Glyma.03G058500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8326045-8327044 Glycine max
Glyma.03G058500 1.0kb downstream 1.0kb downstream 5952 true Chr03: 8327045-8332996 Glycine max
Glyma.03G058500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8331997-8332996 Glycine max
Glyma.03G058500 2.0kb upstream 2.0kb upstream 6952 true Chr03: 8325045-8331996 Glycine max
Glyma.03G058500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8325045-8327044 Glycine max
Glyma.03G058500 2.0kb downstream 2.0kb downstream 6952 true Chr03: 8327045-8333996 Glycine max
Glyma.03G058500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8331997-8333996 Glycine max
Glyma.03G058500 5.0kb upstream 5.0kb upstream 9952 true Chr03: 8322045-8331996 Glycine max
Glyma.03G058500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8322045-8327044 Glycine max
Glyma.03G058500 5.0kb downstream 5.0kb downstream 9952 true Chr03: 8327045-8336996 Glycine max
Glyma.03G058500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8331997-8336996 Glycine max
Glyma.03G058500 10.0kb upstream 10.0kb upstream 14952 true Chr03: 8317045-8331996 Glycine max
Glyma.03G058500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8317045-8327044 Glycine max
Glyma.03G058500 10.0kb downstream 10.0kb downstream 14952 true Chr03: 8327045-8341996 Glycine max
Glyma.03G058500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8331997-8341996 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297107 5265 Fabidae View MSA
124065189 5270 Rosid View MSA
123739014 5271 Pentapetalae View MSA
122792056 5272 Eudicot View MSA
122048075 5273 Angiosperm View MSA
121310844 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0124685 0.0 0.0565451 Low Low
cufflinks 0.707683 0.0 2.56558    
cufflinks 3.52664 0.0 10.759    
cufflinks 6.77289 0.0 19.0477    
cufflinks 0.0237181 0.0 0.101644 Low Low
cufflinks 22.7727 0.0 60.8627 High High
cufflinks 0.0748778 0.0 0.299853 Low  
cufflinks 15.4903 0.0 41.3981   High
cufflinks 0.044     Low Low
cufflinks 6.856     High High
cufflinks 0.199        
cufflinks 0.093     Low  
cufflinks 0.709        
cufflinks 14.471     High High
cufflinks 0.047     Low Low
cufflinks 0.359        
cufflinks 0.537        
cufflinks 0.098     Low  
cufflinks 0.113        
cufflinks 2.526       High
cufflinks 0.06     Low  
cufflinks 0.161        
cufflinks 2.914       High
cufflinks 0.059     Low  
cufflinks 0.829        

0 Strain