Gene : Glyma.03G057500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR24078:SF298 - HEAT SHOCK PROTEIN 40-LIKE Genomic Order:  575
Name:  ? Glyma.03G057500 Secondary Identifier:  ? PAC:30515773
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G057500 0.5kb upstream 0.5kb upstream 5436 true Chr03: 8117254-8122689 Glycine max
Glyma.03G057500 0.5kb upstream 0.5kb upstream 500 false Chr03: 8122190-8122689 Glycine max
Glyma.03G057500 0.5kb downstream 0.5kb downstream 5436 true Chr03: 8116754-8122189 Glycine max
Glyma.03G057500 0.5kb downstream 0.5kb downstream 500 false Chr03: 8116754-8117253 Glycine max
Glyma.03G057500 1.0kb upstream 1.0kb upstream 5936 true Chr03: 8117254-8123189 Glycine max
Glyma.03G057500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8122190-8123189 Glycine max
Glyma.03G057500 1.0kb downstream 1.0kb downstream 5936 true Chr03: 8116254-8122189 Glycine max
Glyma.03G057500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8116254-8117253 Glycine max
Glyma.03G057500 2.0kb upstream 2.0kb upstream 6936 true Chr03: 8117254-8124189 Glycine max
Glyma.03G057500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8122190-8124189 Glycine max
Glyma.03G057500 2.0kb downstream 2.0kb downstream 6936 true Chr03: 8115254-8122189 Glycine max
Glyma.03G057500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8115254-8117253 Glycine max
Glyma.03G057500 5.0kb upstream 5.0kb upstream 9936 true Chr03: 8117254-8127189 Glycine max
Glyma.03G057500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8122190-8127189 Glycine max
Glyma.03G057500 5.0kb downstream 5.0kb downstream 9936 true Chr03: 8112254-8122189 Glycine max
Glyma.03G057500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8112254-8117253 Glycine max
Glyma.03G057500 10.0kb upstream 10.0kb upstream 14936 true Chr03: 8117254-8132189 Glycine max
Glyma.03G057500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8122190-8132189 Glycine max
Glyma.03G057500 10.0kb downstream 10.0kb downstream 14936 true Chr03: 8107254-8122189 Glycine max
Glyma.03G057500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8107254-8117253 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309230 5265 Fabidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.9921 0.0 9.52657    
cufflinks 3.96794 0.0 12.1694    
cufflinks 1.1009 0.0 3.91664   Low
cufflinks 2.95899 0.0 9.43444    
cufflinks 4.19109 0.0 12.7113    
cufflinks 5.32811 0.0 15.6366   High
cufflinks 3.33467 0.0 10.4759    
cufflinks 3.82148 0.0 11.7709    
cufflinks 3.84787 0.0 11.8388    
cufflinks 0.792        
cufflinks 0.633        
cufflinks 0.691        
cufflinks 0.953       High
cufflinks 1.396       High
cufflinks 0.47       Low
cufflinks 0.643        
cufflinks 0.419       Low
cufflinks 0.808        
cufflinks 0.646        
cufflinks 0.797        
cufflinks 0.621        
cufflinks 0.727        
cufflinks 0.72        
cufflinks 0.319       Low
cufflinks 0.588        
cufflinks 0.59        

0 Strain