Gene : Glyma.03G064200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33385:SF4 - PROTEIN XRI1 Genomic Order:  642
Name:  ? Glyma.03G064200 Secondary Identifier:  ? PAC:30517353
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G064200 0.5kb upstream 0.5kb upstream 3531 true Chr03: 10553850-10557380 Glycine max
Glyma.03G064200 0.5kb upstream 0.5kb upstream 500 false Chr03: 10556881-10557380 Glycine max
Glyma.03G064200 0.5kb downstream 0.5kb downstream 3531 true Chr03: 10553350-10556880 Glycine max
Glyma.03G064200 0.5kb downstream 0.5kb downstream 500 false Chr03: 10553350-10553849 Glycine max
Glyma.03G064200 1.0kb upstream 1.0kb upstream 4031 true Chr03: 10553850-10557880 Glycine max
Glyma.03G064200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10556881-10557880 Glycine max
Glyma.03G064200 1.0kb downstream 1.0kb downstream 4031 true Chr03: 10552850-10556880 Glycine max
Glyma.03G064200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10552850-10553849 Glycine max
Glyma.03G064200 2.0kb upstream 2.0kb upstream 5031 true Chr03: 10553850-10558880 Glycine max
Glyma.03G064200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10556881-10558880 Glycine max
Glyma.03G064200 2.0kb downstream 2.0kb downstream 5031 true Chr03: 10551850-10556880 Glycine max
Glyma.03G064200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10551850-10553849 Glycine max
Glyma.03G064200 5.0kb upstream 5.0kb upstream 8031 true Chr03: 10553850-10561880 Glycine max
Glyma.03G064200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10556881-10561880 Glycine max
Glyma.03G064200 5.0kb downstream 5.0kb downstream 8031 true Chr03: 10548850-10556880 Glycine max
Glyma.03G064200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10548850-10553849 Glycine max
Glyma.03G064200 10.0kb upstream 10.0kb upstream 13031 true Chr03: 10553850-10566880 Glycine max
Glyma.03G064200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10556881-10566880 Glycine max
Glyma.03G064200 10.0kb downstream 10.0kb downstream 13031 true Chr03: 10543850-10556880 Glycine max
Glyma.03G064200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10543850-10553849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121612018 5273 Angiosperm Singleton cluster - no MSA
122245392 5265 Fabidae Singleton cluster - no MSA
123989533 5270 Rosid Singleton cluster - no MSA
123564628 5271 Pentapetalae Singleton cluster - no MSA
122599397 5272 Eudicot Singleton cluster - no MSA
120884243 5274 Embryophyte Singleton cluster - no MSA
122925047 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.02319 0.0 15.9502    
cufflinks 6.12092 0.0 19.1973   High
cufflinks 2.37154 0.0 14.637   Low
cufflinks 3.66666 0.0 19.6138    
cufflinks 4.46312 0.0 21.74    
cufflinks 5.01651 0.0 22.9957    
cufflinks 4.35518 0.0 15.1198    
cufflinks 3.08908 0.0 16.301    
cufflinks 4.02333 0.0 14.5507    
cufflinks 0.526        
cufflinks 0.137       Low
cufflinks 0.628        
cufflinks 0.975        
cufflinks 1.13       High
cufflinks 0.198       Low
cufflinks 0.853        
cufflinks 0.307        
cufflinks 0.827        
cufflinks 1.171       High
cufflinks 0.67        
cufflinks 0.199       Low
cufflinks 0.77        
cufflinks 0.874        
cufflinks 0.246       Low
cufflinks 0.641        
cufflinks 0.324        

0 Strain