Gene : Glyma.19G086200 G. max Wm82.a2.v1
Defline:  (1 of 24) PTHR31238:SF42 - GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 10-RELATED Genomic Order:  862
Name:  ? Glyma.19G086200 Secondary Identifier:  ? PAC:30512732
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G086200 0.5kb upstream 0.5kb upstream 1610 true Chr19: 30676796-30678405 Glycine max
Glyma.19G086200 0.5kb upstream 0.5kb upstream 500 false Chr19: 30676796-30677295 Glycine max
Glyma.19G086200 0.5kb downstream 0.5kb downstream 1610 true Chr19: 30677296-30678905 Glycine max
Glyma.19G086200 0.5kb downstream 0.5kb downstream 500 false Chr19: 30678406-30678905 Glycine max
Glyma.19G086200 1.0kb upstream 1.0kb upstream 2110 true Chr19: 30676296-30678405 Glycine max
Glyma.19G086200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 30676296-30677295 Glycine max
Glyma.19G086200 1.0kb downstream 1.0kb downstream 2110 true Chr19: 30677296-30679405 Glycine max
Glyma.19G086200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 30678406-30679405 Glycine max
Glyma.19G086200 2.0kb upstream 2.0kb upstream 3110 true Chr19: 30675296-30678405 Glycine max
Glyma.19G086200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 30675296-30677295 Glycine max
Glyma.19G086200 2.0kb downstream 2.0kb downstream 3110 true Chr19: 30677296-30680405 Glycine max
Glyma.19G086200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 30678406-30680405 Glycine max
Glyma.19G086200 5.0kb upstream 5.0kb upstream 6110 true Chr19: 30672296-30678405 Glycine max
Glyma.19G086200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 30672296-30677295 Glycine max
Glyma.19G086200 5.0kb downstream 5.0kb downstream 6110 true Chr19: 30677296-30683405 Glycine max
Glyma.19G086200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 30678406-30683405 Glycine max
Glyma.19G086200 10.0kb upstream 10.0kb upstream 11110 true Chr19: 30667296-30678405 Glycine max
Glyma.19G086200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 30667296-30677295 Glycine max
Glyma.19G086200 10.0kb downstream 10.0kb downstream 11110 true Chr19: 30677296-30688405 Glycine max
Glyma.19G086200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 30678406-30688405 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314979 5265 Fabidae View MSA
124073814 5270 Rosid View MSA
123752925 5271 Pentapetalae View MSA
122797163 5272 Eudicot View MSA
122049786 5273 Angiosperm View MSA
121349986 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00401297 0.0 0.0245519 Low  
cufflinks 0.0525793 0.0 0.225241 Low  
cufflinks 0.0138018 0.0 0.0670169 Low  
cufflinks 0.00878282 0.0 0.0448821 Low  
cufflinks 3.26344 0.0 11.1579   High
cufflinks 4.01219 0.0 13.4006   High
cufflinks 0.0144905 0.0 0.0700228 Low  
cufflinks 0.00259185 0.0 0.018922 Low Low
cufflinks 1.86964 0.0 6.70343   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.545     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.744        
cufflinks 0.215        
cufflinks 0.605        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.624        
cufflinks 0.046     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low Low
cufflinks 1.808        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.359     High High
cufflinks 0.039     Low Low
cufflinks 16.54     High High

0 Strain