Gene : Glyma.03G005900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21237:SF27 - GRPE PROTEIN HOMOLOG Genomic Order:  59
Name:  ? Glyma.03G005900 Secondary Identifier:  ? PAC:30516171
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G005900 0.5kb upstream 0.5kb upstream 5751 true Chr03: 556124-561874 Glycine max
Glyma.03G005900 0.5kb upstream 0.5kb upstream 500 false Chr03: 561375-561874 Glycine max
Glyma.03G005900 0.5kb downstream 0.5kb downstream 5751 true Chr03: 555624-561374 Glycine max
Glyma.03G005900 0.5kb downstream 0.5kb downstream 500 false Chr03: 555624-556123 Glycine max
Glyma.03G005900 1.0kb upstream 1.0kb upstream 6251 true Chr03: 556124-562374 Glycine max
Glyma.03G005900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 561375-562374 Glycine max
Glyma.03G005900 1.0kb downstream 1.0kb downstream 6251 true Chr03: 555124-561374 Glycine max
Glyma.03G005900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 555124-556123 Glycine max
Glyma.03G005900 2.0kb upstream 2.0kb upstream 7251 true Chr03: 556124-563374 Glycine max
Glyma.03G005900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 561375-563374 Glycine max
Glyma.03G005900 2.0kb downstream 2.0kb downstream 7251 true Chr03: 554124-561374 Glycine max
Glyma.03G005900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 554124-556123 Glycine max
Glyma.03G005900 5.0kb upstream 5.0kb upstream 10251 true Chr03: 556124-566374 Glycine max
Glyma.03G005900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 561375-566374 Glycine max
Glyma.03G005900 5.0kb downstream 5.0kb downstream 10251 true Chr03: 551124-561374 Glycine max
Glyma.03G005900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 551124-556123 Glycine max
Glyma.03G005900 10.0kb upstream 10.0kb upstream 15251 true Chr03: 556124-571374 Glycine max
Glyma.03G005900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 561375-571374 Glycine max
Glyma.03G005900 10.0kb downstream 10.0kb downstream 15251 true Chr03: 546124-561374 Glycine max
Glyma.03G005900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 546124-556123 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301683 5265 Fabidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.7618 0.0 157.036 High High
cufflinks 20.6828 0.0 67.7551 High  
cufflinks 8.27242 0.0 30.0337   Low
cufflinks 14.0836 0.0 47.0855    
cufflinks 18.2716 0.0 60.1047    
cufflinks 13.8002 0.0 46.2904    
cufflinks 18.0468 0.0 59.4815    
cufflinks 15.4762 0.0 51.2789    
cufflinks 13.4543 0.0 45.276    
cufflinks 2.671        
cufflinks 1.643        
cufflinks 1.976        
cufflinks 1.762        
cufflinks 2.229        
cufflinks 2.06        
cufflinks 8.056     High High
cufflinks 1.258       Low
cufflinks 2.029        
cufflinks 3.437        
cufflinks 7.584     High High
cufflinks 2.009        
cufflinks 6.606       High
cufflinks 7.659     High High
cufflinks 1.666        
cufflinks 7.747     High High
cufflinks 1.177       Low

0 Strain