Gene : Glyma.03G010700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11079:SF10 - RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBD Genomic Order:  107
Name:  ? Glyma.03G010700 Secondary Identifier:  ? PAC:30515334
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax RIBOSYN2-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G010700 0.5kb upstream 0.5kb upstream 4800 true Chr03: 1037342-1042141 Glycine max
Glyma.03G010700 0.5kb upstream 0.5kb upstream 500 false Chr03: 1037342-1037841 Glycine max
Glyma.03G010700 0.5kb downstream 0.5kb downstream 4800 true Chr03: 1037842-1042641 Glycine max
Glyma.03G010700 0.5kb downstream 0.5kb downstream 500 false Chr03: 1042142-1042641 Glycine max
Glyma.03G010700 1.0kb upstream 1.0kb upstream 5300 true Chr03: 1036842-1042141 Glycine max
Glyma.03G010700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1036842-1037841 Glycine max
Glyma.03G010700 1.0kb downstream 1.0kb downstream 5300 true Chr03: 1037842-1043141 Glycine max
Glyma.03G010700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1042142-1043141 Glycine max
Glyma.03G010700 2.0kb upstream 2.0kb upstream 6300 true Chr03: 1035842-1042141 Glycine max
Glyma.03G010700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1035842-1037841 Glycine max
Glyma.03G010700 2.0kb downstream 2.0kb downstream 6300 true Chr03: 1037842-1044141 Glycine max
Glyma.03G010700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1042142-1044141 Glycine max
Glyma.03G010700 5.0kb upstream 5.0kb upstream 9300 true Chr03: 1032842-1042141 Glycine max
Glyma.03G010700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1032842-1037841 Glycine max
Glyma.03G010700 5.0kb downstream 5.0kb downstream 9300 true Chr03: 1037842-1047141 Glycine max
Glyma.03G010700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1042142-1047141 Glycine max
Glyma.03G010700 10.0kb upstream 10.0kb upstream 14300 true Chr03: 1027842-1042141 Glycine max
Glyma.03G010700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1027842-1037841 Glycine max
Glyma.03G010700 10.0kb downstream 10.0kb downstream 14300 true Chr03: 1037842-1052141 Glycine max
Glyma.03G010700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1042142-1052141 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304868 5265 Fabidae View MSA
124065963 5270 Rosid View MSA
123740578 5271 Pentapetalae View MSA
122787419 5272 Eudicot View MSA
122047266 5273 Angiosperm View MSA
121347382 5274 Embryophyte View MSA
123428398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.63263 0.0 7.75785   High
cufflinks 1.71932 0.0 5.36687    
cufflinks 1.53837 0.0 4.85714    
cufflinks 1.41063 0.0 4.5253    
cufflinks 1.70612 0.0 5.35143    
cufflinks 1.31935 0.0 4.27725   Low
cufflinks 1.30824 0.0 4.25965   Low
cufflinks 1.70987 0.0 5.33702    
cufflinks 2.57117 0.0 7.58639   High
cufflinks 1.823        
cufflinks 1.169       Low
cufflinks 2.695        
cufflinks 1.979        
cufflinks 2.251        
cufflinks 1.267       Low
cufflinks 2.116        
cufflinks 7.333     High High
cufflinks 2.642        
cufflinks 1.844        
cufflinks 2.369        
cufflinks 1.318        
cufflinks 2.525        
cufflinks 2.757        
cufflinks 1.032       Low
cufflinks 2.295        
cufflinks 1.659        

0 Strain