Gene : Glyma.19G075600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21148:SF1 - PHOSDUCIN-LIKE PROTEIN 3 Genomic Order:  756
Name:  ? Glyma.19G075600 Secondary Identifier:  ? PAC:30512508
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G075600 0.5kb upstream 0.5kb upstream 6029 true Chr19: 27307550-27313578 Glycine max
Glyma.19G075600 0.5kb upstream 0.5kb upstream 500 false Chr19: 27313079-27313578 Glycine max
Glyma.19G075600 0.5kb downstream 0.5kb downstream 6029 true Chr19: 27307050-27313078 Glycine max
Glyma.19G075600 0.5kb downstream 0.5kb downstream 500 false Chr19: 27307050-27307549 Glycine max
Glyma.19G075600 1.0kb upstream 1.0kb upstream 6529 true Chr19: 27307550-27314078 Glycine max
Glyma.19G075600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 27313079-27314078 Glycine max
Glyma.19G075600 1.0kb downstream 1.0kb downstream 6529 true Chr19: 27306550-27313078 Glycine max
Glyma.19G075600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 27306550-27307549 Glycine max
Glyma.19G075600 2.0kb upstream 2.0kb upstream 7529 true Chr19: 27307550-27315078 Glycine max
Glyma.19G075600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 27313079-27315078 Glycine max
Glyma.19G075600 2.0kb downstream 2.0kb downstream 7529 true Chr19: 27305550-27313078 Glycine max
Glyma.19G075600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 27305550-27307549 Glycine max
Glyma.19G075600 5.0kb upstream 5.0kb upstream 10529 true Chr19: 27307550-27318078 Glycine max
Glyma.19G075600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 27313079-27318078 Glycine max
Glyma.19G075600 5.0kb downstream 5.0kb downstream 10529 true Chr19: 27302550-27313078 Glycine max
Glyma.19G075600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 27302550-27307549 Glycine max
Glyma.19G075600 10.0kb upstream 10.0kb upstream 15529 true Chr19: 27307550-27323078 Glycine max
Glyma.19G075600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 27313079-27323078 Glycine max
Glyma.19G075600 10.0kb downstream 10.0kb downstream 15529 true Chr19: 27297550-27313078 Glycine max
Glyma.19G075600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 27297550-27307549 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307184 5265 Fabidae View MSA
124063753 5270 Rosid View MSA
123741848 5271 Pentapetalae View MSA
122790335 5272 Eudicot View MSA
122042488 5273 Angiosperm View MSA
121344718 5274 Embryophyte View MSA
123424986 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6321 0.0 29.5676    
cufflinks 12.4052 0.0 34.0664    
cufflinks 10.1283 0.0 28.2794   Low
cufflinks 12.3424 0.0 33.884    
cufflinks 18.523 0.0 49.7502   High
cufflinks 21.928 0.0 58.602   High
cufflinks 11.0923 0.0 30.7734    
cufflinks 15.9206 0.0 43.0198    
cufflinks 17.2649 0.0 46.4793    
cufflinks 2.846        
cufflinks 1.032       Low
cufflinks 2.502        
cufflinks 4.764       High
cufflinks 5.891       High
cufflinks 1.223       Low
cufflinks 1.796        
cufflinks 2.549        
cufflinks 2.722        
cufflinks 2.828        
cufflinks 1.911        
cufflinks 1.688        
cufflinks 2.187        
cufflinks 2.082        
cufflinks 1.993        
cufflinks 1.878        
cufflinks 2.136        

0 Strain