Gene : Glyma.03G015100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10491 - DTDP-4-DEHYDRORHAMNOSE REDUCTASE Genomic Order:  151
Name:  ? Glyma.03G015100 Secondary Identifier:  ? PAC:30516156
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G015100 0.5kb upstream 0.5kb upstream 4238 true Chr03: 1511145-1515382 Glycine max
Glyma.03G015100 0.5kb upstream 0.5kb upstream 500 false Chr03: 1514883-1515382 Glycine max
Glyma.03G015100 0.5kb downstream 0.5kb downstream 4238 true Chr03: 1510645-1514882 Glycine max
Glyma.03G015100 0.5kb downstream 0.5kb downstream 500 false Chr03: 1510645-1511144 Glycine max
Glyma.03G015100 1.0kb upstream 1.0kb upstream 4738 true Chr03: 1511145-1515882 Glycine max
Glyma.03G015100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1514883-1515882 Glycine max
Glyma.03G015100 1.0kb downstream 1.0kb downstream 4738 true Chr03: 1510145-1514882 Glycine max
Glyma.03G015100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1510145-1511144 Glycine max
Glyma.03G015100 2.0kb upstream 2.0kb upstream 5738 true Chr03: 1511145-1516882 Glycine max
Glyma.03G015100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1514883-1516882 Glycine max
Glyma.03G015100 2.0kb downstream 2.0kb downstream 5738 true Chr03: 1509145-1514882 Glycine max
Glyma.03G015100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1509145-1511144 Glycine max
Glyma.03G015100 5.0kb upstream 5.0kb upstream 8738 true Chr03: 1511145-1519882 Glycine max
Glyma.03G015100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1514883-1519882 Glycine max
Glyma.03G015100 5.0kb downstream 5.0kb downstream 8738 true Chr03: 1506145-1514882 Glycine max
Glyma.03G015100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1506145-1511144 Glycine max
Glyma.03G015100 10.0kb upstream 10.0kb upstream 13738 true Chr03: 1511145-1524882 Glycine max
Glyma.03G015100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1514883-1524882 Glycine max
Glyma.03G015100 10.0kb downstream 10.0kb downstream 13738 true Chr03: 1501145-1514882 Glycine max
Glyma.03G015100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1501145-1511144 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304927 5265 Fabidae View MSA
124068376 5270 Rosid View MSA
123738972 5271 Pentapetalae View MSA
122787583 5272 Eudicot View MSA
122046148 5273 Angiosperm View MSA
121346812 5274 Embryophyte View MSA
123424817 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0317278 0.0 0.14349 Low Low
cufflinks 0.515647 0.0 1.98588   High
cufflinks 0.136077 0.0 0.551649 Low  
cufflinks 0.134557 0.0 0.545954 Low  
cufflinks 0.16118 0.0 0.649506 Low  
cufflinks 0.116841 0.0 0.47771 Low  
cufflinks 0.195647 0.0 0.782615 Low  
cufflinks 0.180551 0.0 0.723027 Low  
cufflinks 0.12336 0.0 0.502574 Low  
cufflinks 0.317        
cufflinks 0.031     Low Low
cufflinks 0.232        
cufflinks 0.174        
cufflinks 0.135        
cufflinks 0.025     Low Low
cufflinks 0.276        
cufflinks 0.033     Low Low
cufflinks 0.506        
cufflinks 0.913       High
cufflinks 0.37        
cufflinks 0.013     Low Low
cufflinks 0.442        
cufflinks 0.311        
cufflinks 0.02     Low Low
cufflinks 0.396        
cufflinks 0.039     Low  

0 Strain