Gene : Glyma.03G015000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF11623 - Protein of unknown function (DUF3252) (DUF3252) Genomic Order:  150
Name:  ? Glyma.03G015000 Secondary Identifier:  ? PAC:30516549
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G015000 0.5kb upstream 0.5kb upstream 1206 true Chr03: 1508917-1510122 Glycine max
Glyma.03G015000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1509623-1510122 Glycine max
Glyma.03G015000 0.5kb downstream 0.5kb downstream 1206 true Chr03: 1508417-1509622 Glycine max
Glyma.03G015000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1508417-1508916 Glycine max
Glyma.03G015000 1.0kb upstream 1.0kb upstream 1706 true Chr03: 1508917-1510622 Glycine max
Glyma.03G015000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1509623-1510622 Glycine max
Glyma.03G015000 1.0kb downstream 1.0kb downstream 1706 true Chr03: 1507917-1509622 Glycine max
Glyma.03G015000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1507917-1508916 Glycine max
Glyma.03G015000 2.0kb upstream 2.0kb upstream 2706 true Chr03: 1508917-1511622 Glycine max
Glyma.03G015000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1509623-1511622 Glycine max
Glyma.03G015000 2.0kb downstream 2.0kb downstream 2706 true Chr03: 1506917-1509622 Glycine max
Glyma.03G015000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1506917-1508916 Glycine max
Glyma.03G015000 5.0kb upstream 5.0kb upstream 5706 true Chr03: 1508917-1514622 Glycine max
Glyma.03G015000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1509623-1514622 Glycine max
Glyma.03G015000 5.0kb downstream 5.0kb downstream 5706 true Chr03: 1503917-1509622 Glycine max
Glyma.03G015000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1503917-1508916 Glycine max
Glyma.03G015000 10.0kb upstream 10.0kb upstream 10706 true Chr03: 1508917-1519622 Glycine max
Glyma.03G015000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1509623-1519622 Glycine max
Glyma.03G015000 10.0kb downstream 10.0kb downstream 10706 true Chr03: 1498917-1509622 Glycine max
Glyma.03G015000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1498917-1508916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121612104 5273 Angiosperm Singleton cluster - no MSA
122245520 5265 Fabidae Singleton cluster - no MSA
123989635 5270 Rosid Singleton cluster - no MSA
123564720 5271 Pentapetalae Singleton cluster - no MSA
122599489 5272 Eudicot Singleton cluster - no MSA
120884329 5274 Embryophyte Singleton cluster - no MSA
122925133 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.94222 0.0 19.0875   High
cufflinks 3.47057 0.0 11.9057   High
cufflinks 0.345073 0.0 1.34957    
cufflinks 1.2902 0.0 4.7479    
cufflinks 0.101036 0.0 0.415178 Low Low
cufflinks 0.236087 0.0 0.937623 Low  
cufflinks 1.58313 0.0 5.75685    
cufflinks 0.848076 0.0 3.18223    
cufflinks 0.0303814 0.0 0.137415 Low Low
cufflinks 1.027        
cufflinks 0.028     Low Low
cufflinks 1.518        
cufflinks 0.022     Low Low
cufflinks 0.026     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.45     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.81        
cufflinks 4.956        
cufflinks 27.123     High High
cufflinks 0.025     Low Low
cufflinks 26.704     High High
cufflinks 16.903     High  
cufflinks 0.027     Low Low
cufflinks 27.487     High High
cufflinks 0.02     Low Low

0 Strain