Gene : Glyma.03G014700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24031:SF91 - ATP-DEPENDENT RNA HELICASE DDX24 Genomic Order:  147
Name:  ? Glyma.03G014700 Secondary Identifier:  ? PAC:30517528
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G014700 0.5kb upstream 0.5kb upstream 8357 true Chr03: 1478456-1486812 Glycine max
Glyma.03G014700 0.5kb upstream 0.5kb upstream 500 false Chr03: 1486313-1486812 Glycine max
Glyma.03G014700 0.5kb downstream 0.5kb downstream 8357 true Chr03: 1477956-1486312 Glycine max
Glyma.03G014700 0.5kb downstream 0.5kb downstream 500 false Chr03: 1477956-1478455 Glycine max
Glyma.03G014700 1.0kb upstream 1.0kb upstream 8857 true Chr03: 1478456-1487312 Glycine max
Glyma.03G014700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1486313-1487312 Glycine max
Glyma.03G014700 1.0kb downstream 1.0kb downstream 8857 true Chr03: 1477456-1486312 Glycine max
Glyma.03G014700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1477456-1478455 Glycine max
Glyma.03G014700 2.0kb upstream 2.0kb upstream 9857 true Chr03: 1478456-1488312 Glycine max
Glyma.03G014700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1486313-1488312 Glycine max
Glyma.03G014700 2.0kb downstream 2.0kb downstream 9857 true Chr03: 1476456-1486312 Glycine max
Glyma.03G014700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1476456-1478455 Glycine max
Glyma.03G014700 5.0kb upstream 5.0kb upstream 12857 true Chr03: 1478456-1491312 Glycine max
Glyma.03G014700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1486313-1491312 Glycine max
Glyma.03G014700 5.0kb downstream 5.0kb downstream 12857 true Chr03: 1473456-1486312 Glycine max
Glyma.03G014700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1473456-1478455 Glycine max
Glyma.03G014700 10.0kb upstream 10.0kb upstream 17857 true Chr03: 1478456-1496312 Glycine max
Glyma.03G014700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1486313-1496312 Glycine max
Glyma.03G014700 10.0kb downstream 10.0kb downstream 17857 true Chr03: 1468456-1486312 Glycine max
Glyma.03G014700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1468456-1478455 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121612002 5273 Angiosperm Singleton cluster - no MSA
122245370 5265 Fabidae Singleton cluster - no MSA
123989513 5270 Rosid Singleton cluster - no MSA
123564609 5271 Pentapetalae Singleton cluster - no MSA
122599378 5272 Eudicot Singleton cluster - no MSA
121349262 5274 Embryophyte View MSA
123425177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30194 0.0 4.26007    
cufflinks 1.09456 0.0 3.65947    
cufflinks 1.49957 0.0 4.79091    
cufflinks 1.43517 0.0 4.62044    
cufflinks 1.36621 0.0 4.44456    
cufflinks 0.462211 0.0 1.67069   Low
cufflinks 1.4369 0.0 4.6518    
cufflinks 1.01311 0.0 3.41449    
cufflinks 0.891089 0.0 3.05289    
cufflinks 0.617        
cufflinks 0.729        
cufflinks 0.995        
cufflinks 0.72        
cufflinks 0.96        
cufflinks 1.277       High
cufflinks 0.812        
cufflinks 0.412       Low
cufflinks 0.967        
cufflinks 1.152       High
cufflinks 0.717        
cufflinks 0.741        
cufflinks 0.775        
cufflinks 0.755        
cufflinks 0.615        
cufflinks 0.666        
cufflinks 0.62        

0 Strain