Gene : Glyma.03G018900 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00168//PF00614 - C2 domain (C2) // Phospholipase D Active site motif (PLDc) Genomic Order:  189
Name:  ? Glyma.03G018900 Secondary Identifier:  ? PAC:30515759
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPASYN-PWY Glycine max pathologic  
Gmax PWY-3561 Glycine max pathologic  
Gmax PWY-7039 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G018900 0.5kb upstream 0.5kb upstream 6253 true Chr03: 1886324-1892576 Glycine max
Glyma.03G018900 0.5kb upstream 0.5kb upstream 500 false Chr03: 1892077-1892576 Glycine max
Glyma.03G018900 0.5kb downstream 0.5kb downstream 6253 true Chr03: 1885824-1892076 Glycine max
Glyma.03G018900 0.5kb downstream 0.5kb downstream 500 false Chr03: 1885824-1886323 Glycine max
Glyma.03G018900 1.0kb upstream 1.0kb upstream 6753 true Chr03: 1886324-1893076 Glycine max
Glyma.03G018900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1892077-1893076 Glycine max
Glyma.03G018900 1.0kb downstream 1.0kb downstream 6753 true Chr03: 1885324-1892076 Glycine max
Glyma.03G018900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1885324-1886323 Glycine max
Glyma.03G018900 2.0kb upstream 2.0kb upstream 7753 true Chr03: 1886324-1894076 Glycine max
Glyma.03G018900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1892077-1894076 Glycine max
Glyma.03G018900 2.0kb downstream 2.0kb downstream 7753 true Chr03: 1884324-1892076 Glycine max
Glyma.03G018900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1884324-1886323 Glycine max
Glyma.03G018900 5.0kb upstream 5.0kb upstream 10753 true Chr03: 1886324-1897076 Glycine max
Glyma.03G018900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1892077-1897076 Glycine max
Glyma.03G018900 5.0kb downstream 5.0kb downstream 10753 true Chr03: 1881324-1892076 Glycine max
Glyma.03G018900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1881324-1886323 Glycine max
Glyma.03G018900 10.0kb upstream 10.0kb upstream 15753 true Chr03: 1886324-1902076 Glycine max
Glyma.03G018900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1892077-1902076 Glycine max
Glyma.03G018900 10.0kb downstream 10.0kb downstream 15753 true Chr03: 1876324-1892076 Glycine max
Glyma.03G018900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1876324-1886323 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782947 5273 Angiosperm View MSA
122245632 5265 Fabidae Singleton cluster - no MSA
124041645 5270 Rosid View MSA
123754147 5271 Pentapetalae View MSA
122775553 5272 Eudicot View MSA
121054445 5274 Embryophyte View MSA
123094427 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.28363 0.0 7.27241   High
cufflinks 0.53817 0.0 1.96984    
cufflinks 0.690428 0.0 2.48393    
cufflinks 0.306508 0.0 1.15359   Low
cufflinks 0.521643 0.0 1.91377    
cufflinks 1.21509 0.0 4.18791    
cufflinks 0.592769 0.0 2.15924    
cufflinks 1.7021 0.0 5.63776   High
cufflinks 0.736238 0.0 2.64189    
cufflinks 4.064        
cufflinks 4.575        
cufflinks 2.187        
cufflinks 0.831       Low
cufflinks 0.463       Low
cufflinks 2.247        
cufflinks 8.683     High High
cufflinks 3.014        
cufflinks 3.14        
cufflinks 1.418       Low
cufflinks 5.952        
cufflinks 3.719        
cufflinks 7.435     High High
cufflinks 4.159        
cufflinks 5.949        
cufflinks 5.55        
cufflinks 3.491        

0 Strain