Gene : Glyma.03G029100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31707:SF11 - PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED Genomic Order:  291
Name:  ? Glyma.03G029100 Secondary Identifier:  ? PAC:30515783
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G029100 0.5kb upstream 0.5kb upstream 4268 true Chr03: 3177807-3182074 Glycine max
Glyma.03G029100 0.5kb upstream 0.5kb upstream 500 false Chr03: 3177807-3178306 Glycine max
Glyma.03G029100 0.5kb downstream 0.5kb downstream 4268 true Chr03: 3178307-3182574 Glycine max
Glyma.03G029100 0.5kb downstream 0.5kb downstream 500 false Chr03: 3182075-3182574 Glycine max
Glyma.03G029100 1.0kb upstream 1.0kb upstream 4768 true Chr03: 3177307-3182074 Glycine max
Glyma.03G029100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3177307-3178306 Glycine max
Glyma.03G029100 1.0kb downstream 1.0kb downstream 4768 true Chr03: 3178307-3183074 Glycine max
Glyma.03G029100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3182075-3183074 Glycine max
Glyma.03G029100 2.0kb upstream 2.0kb upstream 5768 true Chr03: 3176307-3182074 Glycine max
Glyma.03G029100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3176307-3178306 Glycine max
Glyma.03G029100 2.0kb downstream 2.0kb downstream 5768 true Chr03: 3178307-3184074 Glycine max
Glyma.03G029100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3182075-3184074 Glycine max
Glyma.03G029100 5.0kb upstream 5.0kb upstream 8768 true Chr03: 3173307-3182074 Glycine max
Glyma.03G029100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3173307-3178306 Glycine max
Glyma.03G029100 5.0kb downstream 5.0kb downstream 8768 true Chr03: 3178307-3187074 Glycine max
Glyma.03G029100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3182075-3187074 Glycine max
Glyma.03G029100 10.0kb upstream 10.0kb upstream 13768 true Chr03: 3168307-3182074 Glycine max
Glyma.03G029100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3168307-3178306 Glycine max
Glyma.03G029100 10.0kb downstream 10.0kb downstream 13768 true Chr03: 3178307-3192074 Glycine max
Glyma.03G029100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3182075-3192074 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310355 5265 Fabidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0232124 0.0 0.0989194 Low  
cufflinks 0.377382 0.0 1.4092   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0801857 0.0 0.319053 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.02157 0.0 0.0924387 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0333991 0.0 0.138314 Low  
cufflinks 0.0228282 0.0 0.0972906 Low  
cufflinks 0.02     Low Low
cufflinks 12.762     High High
cufflinks 0.077     Low  
cufflinks 0.021     Low  
cufflinks 0.005     Low Low
cufflinks 7.477     High High
cufflinks 0.078     Low  
cufflinks 0.236        
cufflinks 0.039     Low  
cufflinks 0.307        
cufflinks 0.053     Low  
cufflinks 2.246       High
cufflinks 0.044     Low  
cufflinks 0.091     Low  
cufflinks 3.075       High
cufflinks 0.102        
cufflinks 1.424        

0 Strain