Gene : Glyma.03G029700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR21094 - GOS-28 SNARE- RELATED Genomic Order:  297
Name:  ? Glyma.03G029700 Secondary Identifier:  ? PAC:30516185
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G029700 0.5kb upstream 0.5kb upstream 7881 true Chr03: 3281940-3289820 Glycine max
Glyma.03G029700 0.5kb upstream 0.5kb upstream 500 false Chr03: 3281940-3282439 Glycine max
Glyma.03G029700 0.5kb downstream 0.5kb downstream 7881 true Chr03: 3282440-3290320 Glycine max
Glyma.03G029700 0.5kb downstream 0.5kb downstream 500 false Chr03: 3289821-3290320 Glycine max
Glyma.03G029700 1.0kb upstream 1.0kb upstream 8381 true Chr03: 3281440-3289820 Glycine max
Glyma.03G029700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3281440-3282439 Glycine max
Glyma.03G029700 1.0kb downstream 1.0kb downstream 8381 true Chr03: 3282440-3290820 Glycine max
Glyma.03G029700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3289821-3290820 Glycine max
Glyma.03G029700 2.0kb upstream 2.0kb upstream 9381 true Chr03: 3280440-3289820 Glycine max
Glyma.03G029700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3280440-3282439 Glycine max
Glyma.03G029700 2.0kb downstream 2.0kb downstream 9381 true Chr03: 3282440-3291820 Glycine max
Glyma.03G029700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3289821-3291820 Glycine max
Glyma.03G029700 5.0kb upstream 5.0kb upstream 12381 true Chr03: 3277440-3289820 Glycine max
Glyma.03G029700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3277440-3282439 Glycine max
Glyma.03G029700 5.0kb downstream 5.0kb downstream 12381 true Chr03: 3282440-3294820 Glycine max
Glyma.03G029700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3289821-3294820 Glycine max
Glyma.03G029700 10.0kb upstream 10.0kb upstream 17381 true Chr03: 3272440-3289820 Glycine max
Glyma.03G029700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3272440-3282439 Glycine max
Glyma.03G029700 10.0kb downstream 10.0kb downstream 17381 true Chr03: 3282440-3299820 Glycine max
Glyma.03G029700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3289821-3299820 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301795 5265 Fabidae View MSA
124061973 5270 Rosid View MSA
123744427 5271 Pentapetalae View MSA
122791960 5272 Eudicot View MSA
122046989 5273 Angiosperm View MSA
121345350 5274 Embryophyte View MSA
123427960 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.073 0.0 9.92788    
cufflinks 3.31928 0.0 10.5797    
cufflinks 2.02819 0.0 6.87929   Low
cufflinks 3.68625 0.0 11.5719    
cufflinks 6.05171 0.0 17.7348    
cufflinks 9.22188 0.0 25.7609   High
cufflinks 3.38673 0.0 10.7975    
cufflinks 6.27767 0.0 18.3133    
cufflinks 4.61057 0.0 14.0157    
cufflinks 1.248       High
cufflinks 0.674        
cufflinks 0.57        
cufflinks 1.391       High
cufflinks 1.663       High
cufflinks 0.523       Low
cufflinks 0.776        
cufflinks 0.56        
cufflinks 0.854        
cufflinks 0.655        
cufflinks 0.545        
cufflinks 0.825        
cufflinks 0.648        
cufflinks 0.573        
cufflinks 0.894        
cufflinks 0.634        
cufflinks 0.719        

0 Strain