Gene : Glyma.03G027500 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.2.1.1 - Transketolase / Glycoaldehyde transferase Genomic Order:  275
Name:  ? Glyma.03G027500 Secondary Identifier:  ? PAC:30517286
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CALVIN-PWY Glycine max pathologic  
Gmax NONOXIPENT-PWY Glycine max pathologic  
Gmax PENTOSE-P-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G027500 0.5kb upstream 0.5kb upstream 4628 true Chr03: 3020586-3025213 Glycine max
Glyma.03G027500 0.5kb upstream 0.5kb upstream 500 false Chr03: 3024714-3025213 Glycine max
Glyma.03G027500 0.5kb downstream 0.5kb downstream 4628 true Chr03: 3020086-3024713 Glycine max
Glyma.03G027500 0.5kb downstream 0.5kb downstream 500 false Chr03: 3020086-3020585 Glycine max
Glyma.03G027500 1.0kb upstream 1.0kb upstream 5128 true Chr03: 3020586-3025713 Glycine max
Glyma.03G027500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3024714-3025713 Glycine max
Glyma.03G027500 1.0kb downstream 1.0kb downstream 5128 true Chr03: 3019586-3024713 Glycine max
Glyma.03G027500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3019586-3020585 Glycine max
Glyma.03G027500 2.0kb upstream 2.0kb upstream 6128 true Chr03: 3020586-3026713 Glycine max
Glyma.03G027500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3024714-3026713 Glycine max
Glyma.03G027500 2.0kb downstream 2.0kb downstream 6128 true Chr03: 3018586-3024713 Glycine max
Glyma.03G027500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3018586-3020585 Glycine max
Glyma.03G027500 5.0kb upstream 5.0kb upstream 9128 true Chr03: 3020586-3029713 Glycine max
Glyma.03G027500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3024714-3029713 Glycine max
Glyma.03G027500 5.0kb downstream 5.0kb downstream 9128 true Chr03: 3015586-3024713 Glycine max
Glyma.03G027500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3015586-3020585 Glycine max
Glyma.03G027500 10.0kb upstream 10.0kb upstream 14128 true Chr03: 3020586-3034713 Glycine max
Glyma.03G027500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3024714-3034713 Glycine max
Glyma.03G027500 10.0kb downstream 10.0kb downstream 14128 true Chr03: 3010586-3024713 Glycine max
Glyma.03G027500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3010586-3020585 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296838 5265 Fabidae View MSA
124064977 5270 Rosid View MSA
123741287 5271 Pentapetalae View MSA
122787703 5272 Eudicot View MSA
122048752 5273 Angiosperm View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.2011 0.0 138.196 High  
cufflinks 43.5207 0.0 128.611 High  
cufflinks 13.7983 0.0 36.9011   Low
cufflinks 73.0458 0.0 236.842 High  
cufflinks 99.5846 0.0 347.736 High High
cufflinks 44.3273 0.0 131.831 High  
cufflinks 63.9373 0.0 203.037 High  
cufflinks 60.4709 0.0 189.265 High  
cufflinks 52.7912 0.0 161.31 High  
cufflinks 47.65     High High
cufflinks 8.735     High  
cufflinks 19.978     High  
cufflinks 65.92     High High
cufflinks 67.839     High High
cufflinks 8.434     High  
cufflinks 9.627     High  
cufflinks 22.24     High  
cufflinks 28.567     High  
cufflinks 42.735     High High
cufflinks 5.604       Low
cufflinks 16.955     High  
cufflinks 7.675     High Low
cufflinks 10.696     High  
cufflinks 19.018     High  
cufflinks 7.15     High Low
cufflinks 24.558     High  

0 Strain