Gene : Glyma.19G078800 G. max Wm82.a2.v1
Genomic Order:  788 Name:  ? Glyma.19G078800
Secondary Identifier:  ? PAC:30512392
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G078800 0.5kb upstream 0.5kb upstream 1770 true Chr19: 28359785-28361554 Glycine max
Glyma.19G078800 0.5kb upstream 0.5kb upstream 500 false Chr19: 28359785-28360284 Glycine max
Glyma.19G078800 0.5kb downstream 0.5kb downstream 1770 true Chr19: 28360285-28362054 Glycine max
Glyma.19G078800 0.5kb downstream 0.5kb downstream 500 false Chr19: 28361555-28362054 Glycine max
Glyma.19G078800 1.0kb upstream 1.0kb upstream 2270 true Chr19: 28359285-28361554 Glycine max
Glyma.19G078800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 28359285-28360284 Glycine max
Glyma.19G078800 1.0kb downstream 1.0kb downstream 2270 true Chr19: 28360285-28362554 Glycine max
Glyma.19G078800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 28361555-28362554 Glycine max
Glyma.19G078800 2.0kb upstream 2.0kb upstream 3270 true Chr19: 28358285-28361554 Glycine max
Glyma.19G078800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 28358285-28360284 Glycine max
Glyma.19G078800 2.0kb downstream 2.0kb downstream 3270 true Chr19: 28360285-28363554 Glycine max
Glyma.19G078800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 28361555-28363554 Glycine max
Glyma.19G078800 5.0kb upstream 5.0kb upstream 6270 true Chr19: 28355285-28361554 Glycine max
Glyma.19G078800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 28355285-28360284 Glycine max
Glyma.19G078800 5.0kb downstream 5.0kb downstream 6270 true Chr19: 28360285-28366554 Glycine max
Glyma.19G078800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 28361555-28366554 Glycine max
Glyma.19G078800 10.0kb upstream 10.0kb upstream 11270 true Chr19: 28350285-28361554 Glycine max
Glyma.19G078800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 28350285-28360284 Glycine max
Glyma.19G078800 10.0kb downstream 10.0kb downstream 11270 true Chr19: 28360285-28371554 Glycine max
Glyma.19G078800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 28361555-28371554 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041158 5273 Angiosperm View MSA
122311729 5265 Fabidae View MSA
124074224 5270 Rosid View MSA
123741872 5271 Pentapetalae View MSA
122795548 5272 Eudicot View MSA
121309806 5274 Embryophyte View MSA
123347460 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85389 0.0 9.9922    
cufflinks 4.06792 0.0 13.6989    
cufflinks 6.5821 0.0 20.7051    
cufflinks 3.80529 0.0 12.8903    
cufflinks 0.155805 0.0 0.627849 Low Low
cufflinks 0.517317 0.0 1.99096    
cufflinks 14.9172 0.0 42.2775   High
cufflinks 4.15268 0.0 13.9238    
cufflinks 0.420277 0.0 1.63042   Low
cufflinks 1.506        
cufflinks 0.063        
cufflinks 4.779        
cufflinks 0.178        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 2.586        
cufflinks 0.205        
cufflinks 11.469     High High
cufflinks 4.122        
cufflinks 2.932        
cufflinks 0.033     Low Low
cufflinks 3.846        
cufflinks 2.642        
cufflinks 0.119        
cufflinks 4.013        
cufflinks 0.013     Low Low

0 Strain