Gene : Glyma.19G079400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11728:SF8 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)], CYTOPLASMIC Genomic Order:  794
Name:  ? Glyma.19G079400 Secondary Identifier:  ? PAC:30515267
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6118 Glycine max pathologic  
Gmax PWY-7411 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G079400 0.5kb upstream 0.5kb upstream 4333 true Chr19: 28741802-28746134 Glycine max
Glyma.19G079400 0.5kb upstream 0.5kb upstream 500 false Chr19: 28745635-28746134 Glycine max
Glyma.19G079400 0.5kb downstream 0.5kb downstream 4333 true Chr19: 28741302-28745634 Glycine max
Glyma.19G079400 0.5kb downstream 0.5kb downstream 500 false Chr19: 28741302-28741801 Glycine max
Glyma.19G079400 1.0kb upstream 1.0kb upstream 4833 true Chr19: 28741802-28746634 Glycine max
Glyma.19G079400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 28745635-28746634 Glycine max
Glyma.19G079400 1.0kb downstream 1.0kb downstream 4833 true Chr19: 28740802-28745634 Glycine max
Glyma.19G079400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 28740802-28741801 Glycine max
Glyma.19G079400 2.0kb upstream 2.0kb upstream 5833 true Chr19: 28741802-28747634 Glycine max
Glyma.19G079400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 28745635-28747634 Glycine max
Glyma.19G079400 2.0kb downstream 2.0kb downstream 5833 true Chr19: 28739802-28745634 Glycine max
Glyma.19G079400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 28739802-28741801 Glycine max
Glyma.19G079400 5.0kb upstream 5.0kb upstream 8833 true Chr19: 28741802-28750634 Glycine max
Glyma.19G079400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 28745635-28750634 Glycine max
Glyma.19G079400 5.0kb downstream 5.0kb downstream 8833 true Chr19: 28736802-28745634 Glycine max
Glyma.19G079400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 28736802-28741801 Glycine max
Glyma.19G079400 10.0kb upstream 10.0kb upstream 13833 true Chr19: 28741802-28755634 Glycine max
Glyma.19G079400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 28745635-28755634 Glycine max
Glyma.19G079400 10.0kb downstream 10.0kb downstream 13833 true Chr19: 28731802-28745634 Glycine max
Glyma.19G079400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 28731802-28741801 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311516 5265 Fabidae View MSA
124071828 5270 Rosid View MSA
123739883 5271 Pentapetalae View MSA
122793723 5272 Eudicot View MSA
122048104 5273 Angiosperm View MSA
121348116 5274 Embryophyte View MSA
123428470 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0136032 0.0 0.0707489 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.75453 0.0 11.9992   High
cufflinks 0.0584498 0.0 0.240067 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0360915 0.0 0.154275 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.162        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.887       High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain