Gene : Glyma.03G031900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN Genomic Order:  319
Name:  ? Glyma.03G031900 Secondary Identifier:  ? PAC:30518937
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G031900 0.5kb upstream 0.5kb upstream 6500 true Chr03: 3633548-3640047 Glycine max
Glyma.03G031900 0.5kb upstream 0.5kb upstream 500 false Chr03: 3639548-3640047 Glycine max
Glyma.03G031900 0.5kb downstream 0.5kb downstream 6500 true Chr03: 3633048-3639547 Glycine max
Glyma.03G031900 0.5kb downstream 0.5kb downstream 500 false Chr03: 3633048-3633547 Glycine max
Glyma.03G031900 1.0kb upstream 1.0kb upstream 7000 true Chr03: 3633548-3640547 Glycine max
Glyma.03G031900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3639548-3640547 Glycine max
Glyma.03G031900 1.0kb downstream 1.0kb downstream 7000 true Chr03: 3632548-3639547 Glycine max
Glyma.03G031900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3632548-3633547 Glycine max
Glyma.03G031900 2.0kb upstream 2.0kb upstream 8000 true Chr03: 3633548-3641547 Glycine max
Glyma.03G031900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3639548-3641547 Glycine max
Glyma.03G031900 2.0kb downstream 2.0kb downstream 8000 true Chr03: 3631548-3639547 Glycine max
Glyma.03G031900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3631548-3633547 Glycine max
Glyma.03G031900 5.0kb upstream 5.0kb upstream 11000 true Chr03: 3633548-3644547 Glycine max
Glyma.03G031900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3639548-3644547 Glycine max
Glyma.03G031900 5.0kb downstream 5.0kb downstream 11000 true Chr03: 3628548-3639547 Glycine max
Glyma.03G031900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3628548-3633547 Glycine max
Glyma.03G031900 10.0kb upstream 10.0kb upstream 16000 true Chr03: 3633548-3649547 Glycine max
Glyma.03G031900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3639548-3649547 Glycine max
Glyma.03G031900 10.0kb downstream 10.0kb downstream 16000 true Chr03: 3623548-3639547 Glycine max
Glyma.03G031900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3623548-3633547 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245165 5265 Fabidae Singleton cluster - no MSA
123989350 5270 Rosid Singleton cluster - no MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9086 0.0 37.1132    
cufflinks 23.7078 0.0 64.0169 High High
cufflinks 15.8499 0.0 42.3109    
cufflinks 15.2261 0.0 40.6268    
cufflinks 16.8004 0.0 44.8532    
cufflinks 13.3954 0.0 35.755   Low
cufflinks 15.094 0.0 40.2691    
cufflinks 15.1098 0.0 40.3136    
cufflinks 15.118 0.0 40.3342    
cufflinks 5.742        
cufflinks 2.538       Low
cufflinks 7.345     High  
cufflinks 8.432     High  
cufflinks 9.63     High  
cufflinks 4.488        
cufflinks 9.248     High  
cufflinks 3.716       Low
cufflinks 8.04     High  
cufflinks 10.988     High High
cufflinks 9.002     High  
cufflinks 3.401       Low
cufflinks 9.087     High  
cufflinks 9.432     High  
cufflinks 3.533       Low
cufflinks 8.464     High  
cufflinks 4.831        

0 Strain