Gene : Glyma.19G080800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13131:SF5 - CYSTINE TRANSPORTER Genomic Order:  808
Name:  ? Glyma.19G080800 Secondary Identifier:  ? PAC:30511379
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G080800 0.5kb upstream 0.5kb upstream 3470 true Chr19: 29120627-29124096 Glycine max
Glyma.19G080800 0.5kb upstream 0.5kb upstream 500 false Chr19: 29120627-29121126 Glycine max
Glyma.19G080800 0.5kb downstream 0.5kb downstream 3470 true Chr19: 29121127-29124596 Glycine max
Glyma.19G080800 0.5kb downstream 0.5kb downstream 500 false Chr19: 29124097-29124596 Glycine max
Glyma.19G080800 1.0kb upstream 1.0kb upstream 3970 true Chr19: 29120127-29124096 Glycine max
Glyma.19G080800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 29120127-29121126 Glycine max
Glyma.19G080800 1.0kb downstream 1.0kb downstream 3970 true Chr19: 29121127-29125096 Glycine max
Glyma.19G080800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 29124097-29125096 Glycine max
Glyma.19G080800 2.0kb upstream 2.0kb upstream 4970 true Chr19: 29119127-29124096 Glycine max
Glyma.19G080800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 29119127-29121126 Glycine max
Glyma.19G080800 2.0kb downstream 2.0kb downstream 4970 true Chr19: 29121127-29126096 Glycine max
Glyma.19G080800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 29124097-29126096 Glycine max
Glyma.19G080800 5.0kb upstream 5.0kb upstream 7970 true Chr19: 29116127-29124096 Glycine max
Glyma.19G080800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 29116127-29121126 Glycine max
Glyma.19G080800 5.0kb downstream 5.0kb downstream 7970 true Chr19: 29121127-29129096 Glycine max
Glyma.19G080800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 29124097-29129096 Glycine max
Glyma.19G080800 10.0kb upstream 10.0kb upstream 12970 true Chr19: 29111127-29124096 Glycine max
Glyma.19G080800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 29111127-29121126 Glycine max
Glyma.19G080800 10.0kb downstream 10.0kb downstream 12970 true Chr19: 29121127-29134096 Glycine max
Glyma.19G080800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 29124097-29134096 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310082 5265 Fabidae View MSA
124063559 5270 Rosid View MSA
123752283 5271 Pentapetalae View MSA
122786294 5272 Eudicot View MSA
122043856 5273 Angiosperm View MSA
121344453 5274 Embryophyte View MSA
123380048 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.56186 0.0 4.04895    
cufflinks 0.340377 0.0 2.3085   Low
cufflinks 5.64694 0.0 24.5603   High
cufflinks 0.474063 0.0 3.4057    
cufflinks 1.45642 0.0 8.12086    
cufflinks 2.16881 0.0 12.9324    
cufflinks 2.24635 0.0 12.2614    
cufflinks 1.86112 0.0 10.6768    
cufflinks 0.599566 0.0 4.46012    
cufflinks 0.124        
cufflinks 0.094        
cufflinks 0.32       High
cufflinks 0.12        
cufflinks 0.125        
cufflinks 0.16        
cufflinks 0.122        
cufflinks 0.094        
cufflinks 0.091     Low  
cufflinks 0.04     Low Low
cufflinks 0.109        
cufflinks 0.057     Low Low
cufflinks 0.113        
cufflinks 0.096     Low  
cufflinks 0.041     Low Low
cufflinks 0.096     Low  
cufflinks 0.047     Low Low

0 Strain