Gene : Glyma.19G081400 G. max Wm82.a2.v1

Defline:  (1 of 1) PTHR21461:SF10 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Genomic Order:  814
Name:  ? Glyma.19G081400 Secondary Identifier:  ? PAC:30511410

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G081400 0.5kb upstream 0.5kb upstream 2201 true Chr19: 29360434-29362634 Glycine max
Glyma.19G081400 0.5kb upstream 0.5kb upstream 500 false Chr19: 29360434-29360933 Glycine max
Glyma.19G081400 0.5kb downstream 0.5kb downstream 2201 true Chr19: 29360934-29363134 Glycine max
Glyma.19G081400 0.5kb downstream 0.5kb downstream 500 false Chr19: 29362635-29363134 Glycine max
Glyma.19G081400 1.0kb upstream 1.0kb upstream 2701 true Chr19: 29359934-29362634 Glycine max
Glyma.19G081400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 29359934-29360933 Glycine max
Glyma.19G081400 1.0kb downstream 1.0kb downstream 2701 true Chr19: 29360934-29363634 Glycine max
Glyma.19G081400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 29362635-29363634 Glycine max
Glyma.19G081400 2.0kb upstream 2.0kb upstream 3701 true Chr19: 29358934-29362634 Glycine max
Glyma.19G081400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 29358934-29360933 Glycine max
Glyma.19G081400 2.0kb downstream 2.0kb downstream 3701 true Chr19: 29360934-29364634 Glycine max
Glyma.19G081400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 29362635-29364634 Glycine max
Glyma.19G081400 5.0kb upstream 5.0kb upstream 6701 true Chr19: 29355934-29362634 Glycine max
Glyma.19G081400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 29355934-29360933 Glycine max
Glyma.19G081400 5.0kb downstream 5.0kb downstream 6701 true Chr19: 29360934-29367634 Glycine max
Glyma.19G081400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 29362635-29367634 Glycine max
Glyma.19G081400 10.0kb upstream 10.0kb upstream 11701 true Chr19: 29350934-29362634 Glycine max
Glyma.19G081400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 29350934-29360933 Glycine max
Glyma.19G081400 10.0kb downstream 10.0kb downstream 11701 true Chr19: 29360934-29372634 Glycine max
Glyma.19G081400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 29362635-29372634 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312486 5265 Fabidae View MSA
124069004 5270 Rosid View MSA
123739785 5271 Pentapetalae View MSA
122796988 5272 Eudicot View MSA
122047525 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.78951 0.0 2.85827    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0512602 0.0 0.208908 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.192        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.515       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  

0 Strain