Gene : Glyma.03G197600 G. max Wm82.a2.v1
Defline:  (1 of 5) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion Genomic Order:  1976
Name:  ? Glyma.03G197600 Secondary Identifier:  ? PAC:30518583
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G197600 0.5kb upstream 0.5kb upstream 1695 true Chr03: 40690880-40692574 Glycine max
Glyma.03G197600 0.5kb upstream 0.5kb upstream 500 false Chr03: 40692075-40692574 Glycine max
Glyma.03G197600 0.5kb downstream 0.5kb downstream 1695 true Chr03: 40690380-40692074 Glycine max
Glyma.03G197600 0.5kb downstream 0.5kb downstream 500 false Chr03: 40690380-40690879 Glycine max
Glyma.03G197600 1.0kb upstream 1.0kb upstream 2195 true Chr03: 40690880-40693074 Glycine max
Glyma.03G197600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40692075-40693074 Glycine max
Glyma.03G197600 1.0kb downstream 1.0kb downstream 2195 true Chr03: 40689880-40692074 Glycine max
Glyma.03G197600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40689880-40690879 Glycine max
Glyma.03G197600 2.0kb upstream 2.0kb upstream 3195 true Chr03: 40690880-40694074 Glycine max
Glyma.03G197600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40692075-40694074 Glycine max
Glyma.03G197600 2.0kb downstream 2.0kb downstream 3195 true Chr03: 40688880-40692074 Glycine max
Glyma.03G197600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40688880-40690879 Glycine max
Glyma.03G197600 5.0kb upstream 5.0kb upstream 6195 true Chr03: 40690880-40697074 Glycine max
Glyma.03G197600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40692075-40697074 Glycine max
Glyma.03G197600 5.0kb downstream 5.0kb downstream 6195 true Chr03: 40685880-40692074 Glycine max
Glyma.03G197600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40685880-40690879 Glycine max
Glyma.03G197600 10.0kb upstream 10.0kb upstream 11195 true Chr03: 40690880-40702074 Glycine max
Glyma.03G197600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40692075-40702074 Glycine max
Glyma.03G197600 10.0kb downstream 10.0kb downstream 11195 true Chr03: 40680880-40692074 Glycine max
Glyma.03G197600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40680880-40690879 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314502 5265 Fabidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 164.795 0.0 476.551 High  
cufflinks 268.967 0.0 840.262 High  
cufflinks 84.9352 0.0 230.524 High Low
cufflinks 131.399 0.0 370.202 High Low
cufflinks 406.972 0.0 1391.5 High High
cufflinks 336.765 0.0 1101.08 High  
cufflinks 356.263 0.0 1177.86 High  
cufflinks 218.64 0.0 662.9 High  
cufflinks 264.155 0.0 825.697 High  
cufflinks 118.791     High  
cufflinks 48.544     High Low
cufflinks 74.463     High  
cufflinks 279.195     High High
cufflinks 456.726     High High
cufflinks 46.198     High Low
cufflinks 108.752     High  
cufflinks 60.136     High  
cufflinks 88.035     High  
cufflinks 140.342     High  
cufflinks 72.412     High  
cufflinks 63.228     High  
cufflinks 78.282     High  
cufflinks 149.248     High  
cufflinks 46.102     High Low
cufflinks 96.888     High  
cufflinks 75.144     High  

0 Strain