Gene : Glyma.03G190800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10359:SF22 - DEMETER-LIKE PROTEIN 2-RELATED Genomic Order:  1908
Name:  ? Glyma.03G190800 Secondary Identifier:  ? PAC:30517731
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G190800 0.5kb upstream 0.5kb upstream 12299 true Chr03: 40146744-40159042 Glycine max
Glyma.03G190800 0.5kb upstream 0.5kb upstream 500 false Chr03: 40146744-40147243 Glycine max
Glyma.03G190800 0.5kb downstream 0.5kb downstream 12299 true Chr03: 40147244-40159542 Glycine max
Glyma.03G190800 0.5kb downstream 0.5kb downstream 500 false Chr03: 40159043-40159542 Glycine max
Glyma.03G190800 1.0kb upstream 1.0kb upstream 12799 true Chr03: 40146244-40159042 Glycine max
Glyma.03G190800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40146244-40147243 Glycine max
Glyma.03G190800 1.0kb downstream 1.0kb downstream 12799 true Chr03: 40147244-40160042 Glycine max
Glyma.03G190800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40159043-40160042 Glycine max
Glyma.03G190800 2.0kb upstream 2.0kb upstream 13799 true Chr03: 40145244-40159042 Glycine max
Glyma.03G190800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40145244-40147243 Glycine max
Glyma.03G190800 2.0kb downstream 2.0kb downstream 13799 true Chr03: 40147244-40161042 Glycine max
Glyma.03G190800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40159043-40161042 Glycine max
Glyma.03G190800 5.0kb upstream 5.0kb upstream 16799 true Chr03: 40142244-40159042 Glycine max
Glyma.03G190800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40142244-40147243 Glycine max
Glyma.03G190800 5.0kb downstream 5.0kb downstream 16799 true Chr03: 40147244-40164042 Glycine max
Glyma.03G190800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40159043-40164042 Glycine max
Glyma.03G190800 10.0kb upstream 10.0kb upstream 21799 true Chr03: 40137244-40159042 Glycine max
Glyma.03G190800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40137244-40147243 Glycine max
Glyma.03G190800 10.0kb downstream 10.0kb downstream 21799 true Chr03: 40147244-40169042 Glycine max
Glyma.03G190800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40159043-40169042 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312789 5265 Fabidae View MSA
124065197 5270 Rosid View MSA
123746757 5271 Pentapetalae View MSA
122794204 5272 Eudicot View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.51133 0.0 10.5445    
cufflinks 7.48062 0.0 23.1163   High
cufflinks 3.13912 0.0 9.43921    
cufflinks 5.20765 0.0 15.5874    
cufflinks 3.02195 0.0 9.13689    
cufflinks 1.88574 0.0 6.07184   Low
cufflinks 4.75605 0.0 14.0952    
cufflinks 4.81816 0.0 14.263    
cufflinks 3.31728 0.0 9.99809    
cufflinks 1.863       High
cufflinks 0.885       Low
cufflinks 1.735        
cufflinks 1.084        
cufflinks 0.879       Low
cufflinks 0.803       Low
cufflinks 1.307        
cufflinks 1.051        
cufflinks 2.41       High
cufflinks 2.626       High
cufflinks 1.131        
cufflinks 0.903       Low
cufflinks 1.277        
cufflinks 1.764        
cufflinks 1.352        
cufflinks 1.183        
cufflinks 1.27        

0 Strain