Gene : Glyma.03G210000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13169//PTHR13169:SF5 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Genomic Order:  2100
Name:  ? Glyma.03G210000 Secondary Identifier:  ? PAC:30515311
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G210000 0.5kb upstream 0.5kb upstream 3029 true Chr03: 41666780-41669808 Glycine max
Glyma.03G210000 0.5kb upstream 0.5kb upstream 500 false Chr03: 41669309-41669808 Glycine max
Glyma.03G210000 0.5kb downstream 0.5kb downstream 3029 true Chr03: 41666280-41669308 Glycine max
Glyma.03G210000 0.5kb downstream 0.5kb downstream 500 false Chr03: 41666280-41666779 Glycine max
Glyma.03G210000 1.0kb upstream 1.0kb upstream 3529 true Chr03: 41666780-41670308 Glycine max
Glyma.03G210000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 41669309-41670308 Glycine max
Glyma.03G210000 1.0kb downstream 1.0kb downstream 3529 true Chr03: 41665780-41669308 Glycine max
Glyma.03G210000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 41665780-41666779 Glycine max
Glyma.03G210000 2.0kb upstream 2.0kb upstream 4529 true Chr03: 41666780-41671308 Glycine max
Glyma.03G210000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 41669309-41671308 Glycine max
Glyma.03G210000 2.0kb downstream 2.0kb downstream 4529 true Chr03: 41664780-41669308 Glycine max
Glyma.03G210000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 41664780-41666779 Glycine max
Glyma.03G210000 5.0kb upstream 5.0kb upstream 7529 true Chr03: 41666780-41674308 Glycine max
Glyma.03G210000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 41669309-41674308 Glycine max
Glyma.03G210000 5.0kb downstream 5.0kb downstream 7529 true Chr03: 41661780-41669308 Glycine max
Glyma.03G210000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 41661780-41666779 Glycine max
Glyma.03G210000 10.0kb upstream 10.0kb upstream 12529 true Chr03: 41666780-41679308 Glycine max
Glyma.03G210000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 41669309-41679308 Glycine max
Glyma.03G210000 10.0kb downstream 10.0kb downstream 12529 true Chr03: 41656780-41669308 Glycine max
Glyma.03G210000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 41656780-41666779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299177 5265 Fabidae View MSA
124069893 5270 Rosid View MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.78438 0.0 24.84    
cufflinks 3.27722 0.0 25.1351    
cufflinks 3.29285 0.0 24.9286    
cufflinks 8.05089 0.0 44.1306   High
cufflinks 1.1101 0.0 11.1349   Low
cufflinks 2.76605 0.0 17.2787    
cufflinks 3.59883 0.0 26.4069    
cufflinks 6.03146 0.0 35.7869   High
cufflinks 1.07721 0.0 8.90459   Low
cufflinks 0.344       High
cufflinks 0.051     Low Low
cufflinks 0.297        
cufflinks 0.065     Low  
cufflinks 0.031     Low Low
cufflinks 0.037     Low Low
cufflinks 0.226        
cufflinks 0.061     Low  
cufflinks 0.49       High
cufflinks 0.242        
cufflinks 0.245        
cufflinks 0.071        
cufflinks 0.267        
cufflinks 0.167        
cufflinks 0.093        
cufflinks 0.281        
cufflinks 0.052     Low Low

0 Strain