Gene : Glyma.19G067800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23089:SF12 - HIS TRIAD FAMILY PROTEIN 3 Genomic Order:  678
Name:  ? Glyma.19G067800 Secondary Identifier:  ? PAC:30515190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G067800 0.5kb upstream 0.5kb upstream 4931 true Chr19: 19699919-19704849 Glycine max
Glyma.19G067800 0.5kb upstream 0.5kb upstream 500 false Chr19: 19704350-19704849 Glycine max
Glyma.19G067800 0.5kb downstream 0.5kb downstream 4931 true Chr19: 19699419-19704349 Glycine max
Glyma.19G067800 0.5kb downstream 0.5kb downstream 500 false Chr19: 19699419-19699918 Glycine max
Glyma.19G067800 1.0kb upstream 1.0kb upstream 5431 true Chr19: 19699919-19705349 Glycine max
Glyma.19G067800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 19704350-19705349 Glycine max
Glyma.19G067800 1.0kb downstream 1.0kb downstream 5431 true Chr19: 19698919-19704349 Glycine max
Glyma.19G067800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 19698919-19699918 Glycine max
Glyma.19G067800 2.0kb upstream 2.0kb upstream 6431 true Chr19: 19699919-19706349 Glycine max
Glyma.19G067800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 19704350-19706349 Glycine max
Glyma.19G067800 2.0kb downstream 2.0kb downstream 6431 true Chr19: 19697919-19704349 Glycine max
Glyma.19G067800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 19697919-19699918 Glycine max
Glyma.19G067800 5.0kb upstream 5.0kb upstream 9431 true Chr19: 19699919-19709349 Glycine max
Glyma.19G067800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 19704350-19709349 Glycine max
Glyma.19G067800 5.0kb downstream 5.0kb downstream 9431 true Chr19: 19694919-19704349 Glycine max
Glyma.19G067800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 19694919-19699918 Glycine max
Glyma.19G067800 10.0kb upstream 10.0kb upstream 14431 true Chr19: 19699919-19714349 Glycine max
Glyma.19G067800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 19704350-19714349 Glycine max
Glyma.19G067800 10.0kb downstream 10.0kb downstream 14431 true Chr19: 19689919-19704349 Glycine max
Glyma.19G067800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 19689919-19699918 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307996 5265 Fabidae View MSA
124066707 5270 Rosid View MSA
123736753 5271 Pentapetalae View MSA
122786513 5272 Eudicot View MSA
122041956 5273 Angiosperm View MSA
121349409 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.292 0.0 129.311 High Low
cufflinks 91.2433 0.0 254.831 High  
cufflinks 63.3077 0.0 172.015 High  
cufflinks 79.3642 0.0 218.715 High  
cufflinks 77.392 0.0 212.749 High  
cufflinks 66.0475 0.0 179.464 High  
cufflinks 124.909 0.0 361.694 High High
cufflinks 69.4045 0.0 189.53 High  
cufflinks 72.8514 0.0 199.649 High  
cufflinks 9.398     High  
cufflinks 3.847       Low
cufflinks 8.753     High  
cufflinks 8.875     High  
cufflinks 10.848     High  
cufflinks 6.631     High  
cufflinks 9.523     High  
cufflinks 4.243       Low
cufflinks 13.846     High High
cufflinks 9.448     High  
cufflinks 8.749     High  
cufflinks 4.664       Low
cufflinks 9.1     High  
cufflinks 9.433     High  
cufflinks 3.582       Low
cufflinks 9.411     High  
cufflinks 5.582        

0 Strain