Gene : Glyma.03G235500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10653 - F-ACTIN-CAPPING PROTEIN SUBUNIT ALPHA Genomic Order:  2355
Name:  ? Glyma.03G235500 Secondary Identifier:  ? PAC:30516558
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G235500 0.5kb upstream 0.5kb upstream 4548 true Chr03: 43568624-43573171 Glycine max
Glyma.03G235500 0.5kb upstream 0.5kb upstream 500 false Chr03: 43572672-43573171 Glycine max
Glyma.03G235500 0.5kb downstream 0.5kb downstream 4548 true Chr03: 43568124-43572671 Glycine max
Glyma.03G235500 0.5kb downstream 0.5kb downstream 500 false Chr03: 43568124-43568623 Glycine max
Glyma.03G235500 1.0kb upstream 1.0kb upstream 5048 true Chr03: 43568624-43573671 Glycine max
Glyma.03G235500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43572672-43573671 Glycine max
Glyma.03G235500 1.0kb downstream 1.0kb downstream 5048 true Chr03: 43567624-43572671 Glycine max
Glyma.03G235500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43567624-43568623 Glycine max
Glyma.03G235500 2.0kb upstream 2.0kb upstream 6048 true Chr03: 43568624-43574671 Glycine max
Glyma.03G235500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43572672-43574671 Glycine max
Glyma.03G235500 2.0kb downstream 2.0kb downstream 6048 true Chr03: 43566624-43572671 Glycine max
Glyma.03G235500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43566624-43568623 Glycine max
Glyma.03G235500 5.0kb upstream 5.0kb upstream 9048 true Chr03: 43568624-43577671 Glycine max
Glyma.03G235500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43572672-43577671 Glycine max
Glyma.03G235500 5.0kb downstream 5.0kb downstream 9048 true Chr03: 43563624-43572671 Glycine max
Glyma.03G235500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43563624-43568623 Glycine max
Glyma.03G235500 10.0kb upstream 10.0kb upstream 14048 true Chr03: 43568624-43582671 Glycine max
Glyma.03G235500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43572672-43582671 Glycine max
Glyma.03G235500 10.0kb downstream 10.0kb downstream 14048 true Chr03: 43558624-43572671 Glycine max
Glyma.03G235500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43558624-43568623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308271 5265 Fabidae View MSA
124063907 5270 Rosid View MSA
123748268 5271 Pentapetalae View MSA
122793557 5272 Eudicot View MSA
122047118 5273 Angiosperm View MSA
121348843 5274 Embryophyte View MSA
123381036 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.4909 0.0 79.3478 High  
cufflinks 29.0884 0.0 78.2375 High  
cufflinks 54.8495 0.0 155.132 High High
cufflinks 43.4233 0.0 119.886 High  
cufflinks 31.3951 0.0 84.7364 High  
cufflinks 38.1544 0.0 104.21 High  
cufflinks 28.5331 0.0 76.6351 High  
cufflinks 69.3611 0.0 202.168 High High
cufflinks 38.176 0.0 104.307 High  
cufflinks 18.592     High  
cufflinks 22.101     High High
cufflinks 16.427     High  
cufflinks 13.576     High  
cufflinks 15.294     High  
cufflinks 24.345     High High
cufflinks 8.93     High  
cufflinks 8.398     High Low
cufflinks 11.956     High  
cufflinks 10.821     High  
cufflinks 9.81     High  
cufflinks 37.109     High High
cufflinks 9.678     High  
cufflinks 8.231     High Low
cufflinks 16.199     High  
cufflinks 9.325     High  
cufflinks 13.165     High  

0 Strain