Gene : Glyma.03G239000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10457:SF4 - MEVALONATE KINASE Genomic Order:  2390
Name:  ? Glyma.03G239000 Secondary Identifier:  ? PAC:30519281
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-922 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G239000 0.5kb upstream 0.5kb upstream 3521 true Chr03: 43806158-43809678 Glycine max
Glyma.03G239000 0.5kb upstream 0.5kb upstream 500 false Chr03: 43809179-43809678 Glycine max
Glyma.03G239000 0.5kb downstream 0.5kb downstream 3521 true Chr03: 43805658-43809178 Glycine max
Glyma.03G239000 0.5kb downstream 0.5kb downstream 500 false Chr03: 43805658-43806157 Glycine max
Glyma.03G239000 1.0kb upstream 1.0kb upstream 4021 true Chr03: 43806158-43810178 Glycine max
Glyma.03G239000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 43809179-43810178 Glycine max
Glyma.03G239000 1.0kb downstream 1.0kb downstream 4021 true Chr03: 43805158-43809178 Glycine max
Glyma.03G239000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 43805158-43806157 Glycine max
Glyma.03G239000 2.0kb upstream 2.0kb upstream 5021 true Chr03: 43806158-43811178 Glycine max
Glyma.03G239000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 43809179-43811178 Glycine max
Glyma.03G239000 2.0kb downstream 2.0kb downstream 5021 true Chr03: 43804158-43809178 Glycine max
Glyma.03G239000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 43804158-43806157 Glycine max
Glyma.03G239000 5.0kb upstream 5.0kb upstream 8021 true Chr03: 43806158-43814178 Glycine max
Glyma.03G239000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 43809179-43814178 Glycine max
Glyma.03G239000 5.0kb downstream 5.0kb downstream 8021 true Chr03: 43801158-43809178 Glycine max
Glyma.03G239000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 43801158-43806157 Glycine max
Glyma.03G239000 10.0kb upstream 10.0kb upstream 13021 true Chr03: 43806158-43819178 Glycine max
Glyma.03G239000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 43809179-43819178 Glycine max
Glyma.03G239000 10.0kb downstream 10.0kb downstream 13021 true Chr03: 43796158-43809178 Glycine max
Glyma.03G239000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 43796158-43806157 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
122302517 5265 Fabidae View MSA
124063522 5270 Rosid View MSA
123737750 5271 Pentapetalae View MSA
122787384 5272 Eudicot View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.51696 0.0 6.11912   Low
cufflinks 17.9452 0.0 73.3604    
cufflinks 6.68809 0.0 27.5702    
cufflinks 15.826 0.0 63.533    
cufflinks 31.7873 0.0 129.403 High  
cufflinks 37.7967 0.0 156.5 High High
cufflinks 23.3699 0.0 94.6319 High  
cufflinks 9.37317 0.0 35.5556    
cufflinks 23.694 0.0 94.435 High  
cufflinks 6.05       High
cufflinks 0.282       Low
cufflinks 2.862        
cufflinks 6.403       High
cufflinks 9.013     High High
cufflinks 0.247       Low
cufflinks 1.729        
cufflinks 1.943        
cufflinks 4.8        
cufflinks 6.51       High
cufflinks 0.86        
cufflinks 0.62        
cufflinks 1.279        
cufflinks 5.401        
cufflinks 0.409       Low
cufflinks 1.394        
cufflinks 0.888        

0 Strain