Gene : Glyma.03G245000 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  2450
Name:  ? Glyma.03G245000 Secondary Identifier:  ? PAC:30518604
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G245000 0.5kb upstream 0.5kb upstream 12784 true Chr03: 44233378-44246161 Glycine max
Glyma.03G245000 0.5kb upstream 0.5kb upstream 500 false Chr03: 44233378-44233877 Glycine max
Glyma.03G245000 0.5kb downstream 0.5kb downstream 12784 true Chr03: 44233878-44246661 Glycine max
Glyma.03G245000 0.5kb downstream 0.5kb downstream 500 false Chr03: 44246162-44246661 Glycine max
Glyma.03G245000 1.0kb upstream 1.0kb upstream 13284 true Chr03: 44232878-44246161 Glycine max
Glyma.03G245000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44232878-44233877 Glycine max
Glyma.03G245000 1.0kb downstream 1.0kb downstream 13284 true Chr03: 44233878-44247161 Glycine max
Glyma.03G245000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44246162-44247161 Glycine max
Glyma.03G245000 2.0kb upstream 2.0kb upstream 14284 true Chr03: 44231878-44246161 Glycine max
Glyma.03G245000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44231878-44233877 Glycine max
Glyma.03G245000 2.0kb downstream 2.0kb downstream 14284 true Chr03: 44233878-44248161 Glycine max
Glyma.03G245000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44246162-44248161 Glycine max
Glyma.03G245000 5.0kb upstream 5.0kb upstream 17284 true Chr03: 44228878-44246161 Glycine max
Glyma.03G245000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44228878-44233877 Glycine max
Glyma.03G245000 5.0kb downstream 5.0kb downstream 17284 true Chr03: 44233878-44251161 Glycine max
Glyma.03G245000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44246162-44251161 Glycine max
Glyma.03G245000 10.0kb upstream 10.0kb upstream 22284 true Chr03: 44223878-44246161 Glycine max
Glyma.03G245000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44223878-44233877 Glycine max
Glyma.03G245000 10.0kb downstream 10.0kb downstream 22284 true Chr03: 44233878-44256161 Glycine max
Glyma.03G245000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44246162-44256161 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301428 5265 Fabidae View MSA
124065643 5270 Rosid View MSA
123737984 5271 Pentapetalae View MSA
122795670 5272 Eudicot View MSA
122042624 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121350547 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.58797 0.0 26.3809    
cufflinks 6.30587 0.0 21.9512    
cufflinks 7.70689 0.0 26.4549    
cufflinks 9.50279 0.0 32.674   High
cufflinks 7.82456 0.0 26.9182    
cufflinks 5.07651 0.0 18.6132   Low
cufflinks 9.77102 0.0 33.5314   High
cufflinks 6.49084 0.0 22.6245    
cufflinks 8.75982 0.0 29.981    
cufflinks 0.991        
cufflinks 1.577        
cufflinks 1.194        
cufflinks 1.296        
cufflinks 1.475        
cufflinks 1.975       High
cufflinks 1.14        
cufflinks 0.707       Low
cufflinks 1.471        
cufflinks 1.295        
cufflinks 1.198        
cufflinks 1.752       High
cufflinks 1.214        
cufflinks 0.992        
cufflinks 1.229        
cufflinks 1.214        
cufflinks 1.078        

0 Strain