Gene : Glyma.03G261500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33222:SF9 - PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC Genomic Order:  2615
Name:  ? Glyma.03G261500 Secondary Identifier:  ? PAC:30516400
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G261500 0.5kb upstream 0.5kb upstream 2161 true Chr03: 45491778-45493938 Glycine max
Glyma.03G261500 0.5kb upstream 0.5kb upstream 500 false Chr03: 45493439-45493938 Glycine max
Glyma.03G261500 0.5kb downstream 0.5kb downstream 2161 true Chr03: 45491278-45493438 Glycine max
Glyma.03G261500 0.5kb downstream 0.5kb downstream 500 false Chr03: 45491278-45491777 Glycine max
Glyma.03G261500 1.0kb upstream 1.0kb upstream 2661 true Chr03: 45491778-45494438 Glycine max
Glyma.03G261500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 45493439-45494438 Glycine max
Glyma.03G261500 1.0kb downstream 1.0kb downstream 2661 true Chr03: 45490778-45493438 Glycine max
Glyma.03G261500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 45490778-45491777 Glycine max
Glyma.03G261500 2.0kb upstream 2.0kb upstream 3661 true Chr03: 45491778-45495438 Glycine max
Glyma.03G261500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 45493439-45495438 Glycine max
Glyma.03G261500 2.0kb downstream 2.0kb downstream 3661 true Chr03: 45489778-45493438 Glycine max
Glyma.03G261500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 45489778-45491777 Glycine max
Glyma.03G261500 5.0kb upstream 5.0kb upstream 6661 true Chr03: 45491778-45498438 Glycine max
Glyma.03G261500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 45493439-45498438 Glycine max
Glyma.03G261500 5.0kb downstream 5.0kb downstream 6661 true Chr03: 45486778-45493438 Glycine max
Glyma.03G261500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 45486778-45491777 Glycine max
Glyma.03G261500 10.0kb upstream 10.0kb upstream 11661 true Chr03: 45491778-45503438 Glycine max
Glyma.03G261500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 45493439-45503438 Glycine max
Glyma.03G261500 10.0kb downstream 10.0kb downstream 11661 true Chr03: 45481778-45493438 Glycine max
Glyma.03G261500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 45481778-45491777 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309257 5265 Fabidae View MSA
124068427 5270 Rosid View MSA
123747086 5271 Pentapetalae View MSA
122793406 5272 Eudicot View MSA
122042391 5273 Angiosperm View MSA
121347672 5274 Embryophyte View MSA
123425732 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.221 0.0 547.837 High High
cufflinks 17.8571 0.0 65.7994    
cufflinks 5.0562 0.0 23.5529    
cufflinks 14.6251 0.0 55.4083    
cufflinks 0.18057 0.0 0.716683 Low Low
cufflinks 0.0875784 0.0 0.359448 Low Low
cufflinks 6.38591 0.0 26.7083    
cufflinks 11.1505 0.0 45.2223    
cufflinks 0.39688 0.0 1.91708    
cufflinks 2.686        
cufflinks 0.004     Low Low
cufflinks 1.331        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 28.236     High High
cufflinks 0.013     Low  
cufflinks 2.622        
cufflinks 1.751        
cufflinks 34.009     High High
cufflinks 0.005     Low Low
cufflinks 33.39     High High
cufflinks 21.783     High  
cufflinks 0.004     Low Low
cufflinks 32.19     High High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain